ENSG00000050405


Homo sapiens

Features
Gene ID: ENSG00000050405
  
Biological name :LIMA1
  
Synonyms : LIMA1 / LIM domain and actin binding 1 / Q9UHB6
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: -1
Band: q13.12
Gene start: 50175788
Gene end: 50283546
  
Corresponding Affymetrix probe sets: 217892_s_at (Human Genome U133 Plus 2.0 Array)   222456_s_at (Human Genome U133 Plus 2.0 Array)   222457_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000450266
Ensembl peptide - ENSP00000449890
Ensembl peptide - ENSP00000450087
Ensembl peptide - ENSP00000340184
Ensembl peptide - ENSP00000378400
Ensembl peptide - ENSP00000447975
Ensembl peptide - ENSP00000448411
Ensembl peptide - ENSP00000448463
Ensembl peptide - ENSP00000448706
Ensembl peptide - ENSP00000448779
NCBI entrez gene - 51474     See in Manteia.
OMIM - 608364
RefSeq - XM_017019430
RefSeq - NM_001113546
RefSeq - NM_001113547
RefSeq - NM_001243775
RefSeq - NM_016357
RefSeq - XM_011538455
RefSeq - XM_017019429
RefSeq Peptide - NP_001107018
RefSeq Peptide - NP_001107019
RefSeq Peptide - NP_001230704
RefSeq Peptide - NP_057441
swissprot - F8VTU2
swissprot - F8VVQ7
swissprot - F8VS07
swissprot - F8VQE1
swissprot - F8VRN8
swissprot - Q9UHB6
Ensembl - ENSG00000050405
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Lima1ENSMUSG00000023022Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LIMD2 / Q9BT23 / LIM domain containing 2ENSG000001364907


Protein motifs (from Interpro)
Interpro ID Name
 IPR001781  Zinc finger, LIM-type
 IPR028740  LIM domain and actin-binding protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030835 negative regulation of actin filament depolymerization IEA
 biological_processGO:0031529 ruffle organization IDA
 biological_processGO:0051017 actin filament bundle assembly IEA
 cellular_componentGO:0001725 stress fiber IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005886 plasma membrane IDA
 cellular_componentGO:0005903 brush border IEA
 cellular_componentGO:0005925 focal adhesion IDA
 cellular_componentGO:0015629 actin cytoskeleton IDA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0032154 cleavage furrow IDA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0003785 actin monomer binding IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0045296 cadherin binding IDA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0051015 actin filament binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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