ENSG00000100226


Homo sapiens

Features
Gene ID: ENSG00000100226
  
Biological name :GTPBP1
  
Synonyms : GTP binding protein 1 / GTPBP1 / O00178
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 22
Strand: 1
Band: q13.1
Gene start: 38705723
Gene end: 38738299
  
Corresponding Affymetrix probe sets: 205274_at (Human Genome U133 Plus 2.0 Array)   205275_at (Human Genome U133 Plus 2.0 Array)   205276_s_at (Human Genome U133 Plus 2.0 Array)   219357_at (Human Genome U133 Plus 2.0 Array)   226359_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000442881
Ensembl peptide - ENSP00000442628
Ensembl peptide - ENSP00000445610
Ensembl peptide - ENSP00000216044
Ensembl peptide - ENSP00000388147
Ensembl peptide - ENSP00000397891
Ensembl peptide - ENSP00000437430
Ensembl peptide - ENSP00000439505
Ensembl peptide - ENSP00000442394
NCBI entrez gene - 9567     See in Manteia.
OMIM - 602245
RefSeq - XM_017029103
RefSeq - NM_004286
RefSeq - XM_011530537
RefSeq - XM_017029099
RefSeq - XM_017029100
RefSeq - XM_017029101
RefSeq - XM_017029102
RefSeq Peptide - NP_004277
swissprot - B0QY59
swissprot - O00178
swissprot - F5H257
swissprot - F5H716
swissprot - F5H7C0
swissprot - F8WAZ4
swissprot - H0YF75
swissprot - H0YH10
swissprot - H0YGA8
Ensembl - ENSG00000100226
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gtpbp1ENSDARG00000053467Danio rerio
 gtpbp1lENSDARG00000042900Danio rerio
 GTPBP1ENSGALG00000030783Gallus gallus
 Gtpbp1ENSMUSG00000042535Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GTPBP2 / Q9BX10 / GTP binding protein 2ENSG0000017243240


Protein motifs (from Interpro)
Interpro ID Name
 IPR000795  Transcription factor, GTP-binding domain
 IPR009000  Translation protein, beta-barrel domain superfamily
 IPR009001  Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR035531  GTP binding protein 1-like, GTP-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006955 immune response TAS
 biological_processGO:0007165 signal transduction TAS
 biological_processGO:0046039 GTP metabolic process IEA
 biological_processGO:0061014 positive regulation of mRNA catabolic process IEA
 cellular_componentGO:0000177 cytoplasmic exosome (RNase complex) IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016020 membrane HDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0003924 GTPase activity ISS
 molecular_functionGO:0005525 GTP binding TAS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr