ENSG00000110713


Homo sapiens

Features
Gene ID: ENSG00000110713
  
Biological name :NUP98
  
Synonyms : nucleoporin 98 / NUP98 / P52948
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: -1
Band: p15.4
Gene start: 3671083
Gene end: 3797792
  
Corresponding Affymetrix probe sets: 203194_s_at (Human Genome U133 Plus 2.0 Array)   203195_s_at (Human Genome U133 Plus 2.0 Array)   210793_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000380208
Ensembl peptide - ENSP00000432275
Ensembl peptide - ENSP00000433226
Ensembl peptide - ENSP00000433515
Ensembl peptide - ENSP00000434698
Ensembl peptide - ENSP00000436226
Ensembl peptide - ENSP00000316032
Ensembl peptide - ENSP00000347404
Ensembl peptide - ENSP00000352091
Ensembl peptide - ENSP00000380199
Ensembl peptide - ENSP00000380202
Ensembl peptide - ENSP00000413146
Ensembl peptide - ENSP00000432142
NCBI entrez gene - 4928     See in Manteia.
OMIM - 601021
RefSeq - NM_139132
RefSeq - NM_016320
RefSeq - NM_139131
RefSeq - NM_005387
RefSeq Peptide - NP_624358
RefSeq Peptide - NP_057404
RefSeq Peptide - NP_005378
RefSeq Peptide - NP_624357
swissprot - P52948
swissprot - E9PNN0
swissprot - H0YCR0
swissprot - H0YCT1
swissprot - H0YDA1
swissprot - H0YDF4
swissprot - H0YEN4
swissprot - H7BYP8
swissprot - H7C3P6
Ensembl - ENSG00000110713
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nup98ENSDARG00000074955Danio rerio
 NUP98ENSGALG00000040018Gallus gallus
 Nup98ENSMUSG00000063550Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007230  Peptidase S59, nucleoporin
 IPR021967  Nuclear protein 96
 IPR025574  Nucleoporin FG repeat
 IPR036903  Peptidase S59, nucleoporin superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000973 posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery IBA
 biological_processGO:0006110 regulation of glycolytic process TAS
 biological_processGO:0006260 DNA replication IMP
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0006405 RNA export from nucleus IBA
 biological_processGO:0006406 mRNA export from nucleus TAS
 biological_processGO:0006409 tRNA export from nucleus TAS
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0006606 protein import into nucleus IBA
 biological_processGO:0006913 nucleocytoplasmic transport TAS
 biological_processGO:0006999 nuclear pore organization NAS
 biological_processGO:0007062 sister chromatid cohesion TAS
 biological_processGO:0007077 mitotic nuclear envelope disassembly TAS
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016032 viral process TAS
 biological_processGO:0016925 protein sumoylation TAS
 biological_processGO:0016973 poly(A)+ mRNA export from nucleus IEA
 biological_processGO:0019083 viral transcription TAS
 biological_processGO:0034398 telomere tethering at nuclear periphery IBA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0048026 positive regulation of mRNA splicing, via spliceosome IMP
 biological_processGO:0051028 mRNA transport IEA
 biological_processGO:0051292 nuclear pore complex assembly IMP
 biological_processGO:0060964 regulation of gene silencing by miRNA TAS
 biological_processGO:0075733 intracellular transport of virus TAS
 biological_processGO:1900034 regulation of cellular response to heat TAS
 cellular_componentGO:0000776 kinetochore IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005635 nuclear envelope TAS
 cellular_componentGO:0005643 nuclear pore NAS
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016604 nuclear body IDA
 cellular_componentGO:0031080 nuclear pore outer ring NAS
 cellular_componentGO:0031965 nuclear membrane IEA
 cellular_componentGO:0034399 nuclear periphery IDA
 cellular_componentGO:0042405 nuclear inclusion body IDA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 cellular_componentGO:0043657 host cell IEA
 cellular_componentGO:0044614 nuclear pore cytoplasmic filaments IBA
 cellular_componentGO:0044615 nuclear pore nuclear basket IDA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0003729 mRNA binding IMP
 molecular_functionGO:0005215 transporter activity TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008139 nuclear localization sequence binding IBA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008236 serine-type peptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0017056 structural constituent of nuclear pore NAS
 molecular_functionGO:0042277 peptide binding IEA
 molecular_functionGO:1990841 promoter-specific chromatin binding IMP


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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