ENSG00000130720


Homo sapiens

Features
Gene ID: ENSG00000130720
  
Biological name :FIBCD1
  
Synonyms : FIBCD1 / fibrinogen C domain containing 1 / Q8N539
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: -1
Band: q34.12
Gene start: 130902438
Gene end: 130939286
  
Corresponding Affymetrix probe sets: 238943_at (Human Genome U133 Plus 2.0 Array)   240042_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000395319
Ensembl peptide - ENSP00000414501
Ensembl peptide - ENSP00000361412
Ensembl peptide - ENSP00000361413
Ensembl peptide - ENSP00000393894
NCBI entrez gene - 84929     See in Manteia.
OMIM - 613357
RefSeq - NM_001145106
RefSeq - NM_032843
RefSeq Peptide - NP_001138578
RefSeq Peptide - NP_116232
swissprot - X6RDH7
swissprot - H0Y4Y8
swissprot - Q8N539
swissprot - A3KFJ8
Ensembl - ENSG00000130720
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 fibcd1ENSDARG00000060393Danio rerio
 si:dkeyp-51b7.3ENSDARG00000074640Danio rerio
 FIBCD1ENSGALG00000003866Gallus gallus
 A2AV25ENSMUSG00000026841Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FCN1 / O00602 / ficolin 1ENSG0000008526530
FCN2 / Q15485 / ficolin 2ENSG0000016033929
Q8NI99 / ANGPTL6 / angiopoietin like 6ENSG0000013081227
MFAP4 / P55083 / microfibril associated protein 4ENSG0000016648227
Q9UKU9 / ANGPTL2 / angiopoietin like 2ENSG0000013685927
O95841 / ANGPTL1 / angiopoietin like 1ENSG0000011619426
FCN3 / O75636 / ficolin 3ENSG0000014274825
ANGPT4 / Q9Y264 / angiopoietin 4ENSG0000010128024
FGL2 / Q14314 / fibrinogen like 2ENSG0000012795123
ANGPT1 / Q15389 / angiopoietin 1ENSG0000015418823
O43827 / ANGPTL7 / angiopoietin like 7ENSG0000017181922
ANGPT2 / O15123 / angiopoietin 2ENSG0000009187922


Protein motifs (from Interpro)
Interpro ID Name
 IPR002181  Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
 IPR014715  Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2
 IPR014716  Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1
 IPR020837  Fibrinogen, conserved site
 IPR036056  Fibrinogen-like, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008061 chitin binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr