ENSG00000139496


Homo sapiens

Features
Gene ID: ENSG00000139496
  
Biological name :NUP58
  
Synonyms : nucleoporin 58 / NUP58 / Q9BVL2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 13
Strand: 1
Band: q12.13
Gene start: 25301524
Gene end: 25349800
  
Corresponding Affymetrix probe sets: 204435_at (Human Genome U133 Plus 2.0 Array)   223984_s_at (Human Genome U133 Plus 2.0 Array)   225047_at (Human Genome U133 Plus 2.0 Array)   241425_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000418904
Ensembl peptide - ENSP00000418341
Ensembl peptide - ENSP00000418555
Ensembl peptide - ENSP00000371137
Ensembl peptide - ENSP00000371155
Ensembl peptide - ENSP00000371166
Ensembl peptide - ENSP00000408147
Ensembl peptide - ENSP00000418244
NCBI entrez gene - 9818     See in Manteia.
OMIM - 607615
RefSeq - XM_017020881
RefSeq - NM_001008564
RefSeq - NM_014089
RefSeq - XM_005266600
RefSeq - XM_011535328
RefSeq - XM_011535329
RefSeq - XM_017020880
RefSeq Peptide - NP_054808
RefSeq Peptide - NP_001008564
swissprot - F8WC35
swissprot - F8WCJ8
swissprot - H7BYF2
swissprot - Q9BVL2
swissprot - F8WBZ1
swissprot - Q5JRG1
Ensembl - ENSG00000139496
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nup58ENSDARG00000033965Danio rerio
 NUP58ENSGALG00000017111Gallus gallus
 Nupl1ENSMUSG00000114797Mus musculus
 Nupl1ENSMUSG00000063895Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR024882  Nucleoporin p58/p45


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006110 regulation of glycolytic process TAS
 biological_processGO:0006406 mRNA export from nucleus TAS
 biological_processGO:0006409 tRNA export from nucleus TAS
 biological_processGO:0006606 protein import into nucleus IBA
 biological_processGO:0006913 nucleocytoplasmic transport IEA
 biological_processGO:0007077 mitotic nuclear envelope disassembly TAS
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016032 viral process TAS
 biological_processGO:0016925 protein sumoylation TAS
 biological_processGO:0019083 viral transcription TAS
 biological_processGO:0042306 regulation of protein import into nucleus IEA
 biological_processGO:0051028 mRNA transport IEA
 biological_processGO:0051260 protein homooligomerization IEA
 biological_processGO:0051290 protein heterotetramerization IEA
 biological_processGO:0051291 protein heterooligomerization IEA
 biological_processGO:0060964 regulation of gene silencing by miRNA TAS
 biological_processGO:0070208 protein heterotrimerization IEA
 biological_processGO:0075733 intracellular transport of virus TAS
 biological_processGO:1900034 regulation of cellular response to heat TAS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005635 nuclear envelope TAS
 cellular_componentGO:0005643 nuclear pore IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031965 nuclear membrane IEA
 cellular_componentGO:0043657 host cell IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008139 nuclear localization sequence binding IBA
 molecular_functionGO:0017056 structural constituent of nuclear pore IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000139496 NUP58 / Q9BVL2 / nucleoporin 58  / complex
 ENSG00000213024 NUP62 / P37198 / nucleoporin 62  / complex
 ENSG00000138750 NUP54 / Q7Z3B4 / nucleoporin 54  / complex






 

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