ENSG00000148843


Homo sapiens

Features
Gene ID: ENSG00000148843
  
Biological name :PDCD11
  
Synonyms : PDCD11 / programmed cell death 11 / Q14690
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 10
Strand: 1
Band: q24.33
Gene start: 103396648
Gene end: 103446292
  
Corresponding Affymetrix probe sets: 212422_at (Human Genome U133 Plus 2.0 Array)   212424_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000358812
Ensembl peptide - ENSP00000474606
NCBI entrez gene - 22984     See in Manteia.
OMIM - 612333
RefSeq - XM_011539540
RefSeq - NM_014976
RefSeq - XM_005269647
RefSeq - XM_011539538
RefSeq - XM_011539539
RefSeq Peptide - NP_055791
swissprot - Q14690
swissprot - S4R3Q4
Ensembl - ENSG00000148843
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pdcd11ENSDARG00000052480Danio rerio
 ENSGALG00000008265Gallus gallus
 Pdcd11ENSMUSG00000025047Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003029  S1 domain
 IPR003107  HAT (Half-A-TPR) repeat
 IPR008847  Suppressor of forked
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR012340  Nucleic acid-binding, OB-fold
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR022967  RNA-binding domain, S1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
 biological_processGO:0000466 maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
 biological_processGO:0006364 rRNA processing TAS
 biological_processGO:0006396 RNA processing IEA
 biological_processGO:0006397 mRNA processing IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005730 nucleolus IBA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0032040 small-subunit processome IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008134 transcription factor binding IPI


Pathways (from Reactome)
Pathway description
rRNA modification in the nucleus and cytosol
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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