ENSG00000155506


Homo sapiens

Features
Gene ID: ENSG00000155506
  
Biological name :LARP1
  
Synonyms : La ribonucleoprotein domain family member 1 / LARP1 / Q6PKG0
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: 1
Band: q33.2
Gene start: 154712902
Gene end: 154817607
  
Corresponding Affymetrix probe sets: 210966_x_at (Human Genome U133 Plus 2.0 Array)   212137_at (Human Genome U133 Plus 2.0 Array)   212193_s_at (Human Genome U133 Plus 2.0 Array)   239663_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000430169
Ensembl peptide - ENSP00000429904
Ensembl peptide - ENSP00000430438
Ensembl peptide - ENSP00000431072
Ensembl peptide - ENSP00000430815
Ensembl peptide - ENSP00000336721
Ensembl peptide - ENSP00000427731
Ensembl peptide - ENSP00000428251
Ensembl peptide - ENSP00000428589
Ensembl peptide - ENSP00000429624
Ensembl peptide - ENSP00000429710
Ensembl peptide - ENSP00000429852
NCBI entrez gene - 23367     See in Manteia.
OMIM - 612059
RefSeq - XM_017009284
RefSeq - NM_015315
RefSeq - XM_005268404
RefSeq - XM_005268406
RefSeq - XM_005268407
RefSeq - XM_005268408
RefSeq - XM_006714775
RefSeq - XM_006714776
RefSeq - XM_011537614
RefSeq - XM_011537615
RefSeq - XM_011537616
RefSeq - XM_011537617
RefSeq - XM_011537618
RefSeq - XM_017009283
RefSeq Peptide - NP_056130
swissprot - E5RH50
swissprot - H0YAN4
swissprot - H0YAX9
swissprot - H0YBJ5
swissprot - H0YBM7
swissprot - H0YBR8
swissprot - H0YBW1
swissprot - H0YC33
swissprot - H0YC73
swissprot - A0A0B4J210
swissprot - E5RHK4
swissprot - Q6PKG0
Ensembl - ENSG00000155506
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 larp1ENSDARG00000101722Danio rerio
 LARP1ENSGALG00000040109Gallus gallus
 Larp1ENSMUSG00000037331Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LARP1B / Q659C4 / La ribonucleoprotein domain family member 1BENSG0000013870951


Protein motifs (from Interpro)
Interpro ID Name
 IPR006607  Protein of unknown function DM15
 IPR006630  La-type HTH domain
 IPR036388  Winged helix-like DNA-binding domain superfamily
 IPR036390  Winged helix DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 biological_processGO:0006413 translational initiation IMP
 biological_processGO:0006417 regulation of translation IEA
 biological_processGO:0008283 cell proliferation IMP
 biological_processGO:0016239 positive regulation of macroautophagy IMP
 biological_processGO:0017148 negative regulation of translation IMP
 biological_processGO:0031929 TOR signaling IMP
 biological_processGO:0038202 TORC1 signaling IMP
 biological_processGO:0045070 positive regulation of viral genome replication IMP
 biological_processGO:0045727 positive regulation of translation IEA
 biological_processGO:0048255 mRNA stabilization IMP
 biological_processGO:0072752 cellular response to rapamycin IMP
 biological_processGO:1990928 response to amino acid starvation IMP
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005844 polysome IDA
 cellular_componentGO:0010494 cytoplasmic stress granule IDA
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0031931 TORC1 complex IDA
 molecular_functionGO:0000339 RNA cap binding IDA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003730 mRNA 3"-UTR binding IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008190 eukaryotic initiation factor 4E binding IPI
 molecular_functionGO:0008494 translation activator activity IMP
 molecular_functionGO:0031369 translation initiation factor binding IDA
 molecular_functionGO:0045296 cadherin binding IDA
 molecular_functionGO:0048027 mRNA 5"-UTR binding IMP


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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