ENSG00000167323


Homo sapiens

Features
Gene ID: ENSG00000167323
  
Biological name :STIM1
  
Synonyms : Q13586 / STIM1 / stromal interaction molecule 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: 1
Band: p15.4
Gene start: 3854527
Gene end: 4093210
  
Corresponding Affymetrix probe sets: 1557477_at (Human Genome U133 Plus 2.0 Array)   202764_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000431878
Ensembl peptide - ENSP00000432210
Ensembl peptide - ENSP00000478059
Ensembl peptide - ENSP00000436208
Ensembl peptide - ENSP00000434848
Ensembl peptide - ENSP00000434767
Ensembl peptide - ENSP00000434200
Ensembl peptide - ENSP00000433949
Ensembl peptide - ENSP00000433266
Ensembl peptide - ENSP00000432383
Ensembl peptide - ENSP00000432378
Ensembl peptide - ENSP00000300737
Ensembl peptide - ENSP00000431191
NCBI entrez gene - 6786     See in Manteia.
OMIM - 605921
RefSeq - NM_001277962
RefSeq - NM_003156
RefSeq - NM_001277961
RefSeq Peptide - NP_001264890
RefSeq Peptide - NP_001264891
RefSeq Peptide - NP_003147
swissprot - E9PMB4
swissprot - E9PJ19
swissprot - E9PIQ8
swissprot - G0XQ39
swissprot - H0YDB2
swissprot - E9PRZ7
swissprot - Q13586
swissprot - E9PRE4
swissprot - E9PR09
swissprot - E9PR07
swissprot - E9PNJ4
swissprot - E9PN27
Ensembl - ENSG00000167323
  
Related genetic diseases (OMIM): 185070 - Stormorken syndrome, 185070
  605921 - Myopathy, tubular aggregate, 1 160565
  612783 - Immunodeficiency 10, 612783
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 stim1aENSDARG00000060723Danio rerio
 stim1bENSDARG00000061560Danio rerio
 STIM1ENSGALG00000041762Gallus gallus
 Stim1ENSMUSG00000030987Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
STIM2 / Q9P246 / stromal interaction molecule 2ENSG000001096898


Protein motifs (from Interpro)
Interpro ID Name
 IPR001660  Sterile alpha motif domain
 IPR013761  Sterile alpha motif/pointed domain superfamily
 IPR030463  Stromal interaction molecule 1
 IPR032393  Stromal interaction molecule, Orai1-activating region


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002115 store-operated calcium entry IDA
 biological_processGO:0005513 detection of calcium ion IDA
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006816 calcium ion transport IEA
 biological_processGO:0006874 cellular calcium ion homeostasis IBA
 biological_processGO:0032237 activation of store-operated calcium channel activity IEA
 biological_processGO:0045766 positive regulation of angiogenesis IMP
 biological_processGO:0051924 regulation of calcium ion transport IEA
 biological_processGO:0070166 enamel mineralization IMP
 biological_processGO:0070588 calcium ion transmembrane transport IEA
 biological_processGO:1903779 regulation of cardiac conduction TAS
 biological_processGO:2001256 regulation of store-operated calcium entry IMP
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005783 endoplasmic reticulum IDA
 cellular_componentGO:0005789 endoplasmic reticulum membrane TAS
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005874 microtubule IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016529 sarcoplasmic reticulum IEA
 cellular_componentGO:0030176 integral component of endoplasmic reticulum membrane IEA
 cellular_componentGO:0032541 cortical endoplasmic reticulum TAS
 cellular_componentGO:0033017 sarcoplasmic reticulum membrane IDA
 molecular_functionGO:0002020 protease binding IPI
 molecular_functionGO:0005246 calcium channel regulator activity IEA
 molecular_functionGO:0005509 calcium ion binding IDA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0042802 identical protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0051010 microtubule plus-end binding IDA


Pathways (from Reactome)
Pathway description
Elevation of cytosolic Ca2+ levels
Ion homeostasis
Antigen activates B Cell Receptor (BCR) leading to generation of second messengers


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000348 High forehead "An abnormally increased height of the forehead." [HPO:curators]
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 HP:0000490 Deep set eyes 
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 HP:0000544 External ophthalmoplegia 
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 HP:0000615 Abnormality of the pupils 
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 HP:0000616 Miosis 
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 HP:0000662 Night blindness 
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 HP:0000966 Hypohidrosis "Abnormally diminished capacity to sweat." [HPO:curators]
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 HP:0000979 Purpura 
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001371 Contractures 
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 HP:0001746 Asplenia "Absence (aplasia) of the spleen." [HPO:curators]
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 HP:0001872 Abnormality of thrombocytes 
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 HP:0001873 Thrombocytopenia 
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 HP:0001890 Autoimmune hemolytic anemia 
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 HP:0001903 Anemia 
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 HP:0001928 Abnormality of coagulation 
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 HP:0001954 Fever, episodic "Periodic (episodic or recurrent) bouts of fever that do not have an infectious cause." [HPO:curators]
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 HP:0002093 Respiratory insufficiency 
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 HP:0002164 Nail dysplasia 
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 HP:0002167 Neurological speech impairment 
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 HP:0002359 Frequent falls 
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 HP:0002522 Areflexia in lower limbs 
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 HP:0002600 Hyporeflexia of lower limbs 
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 HP:0002716 Lymphadenopathy 
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 HP:0002718 Recurrent bacterial infections 
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 HP:0002719 Recurrent infections 
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 HP:0002721 Immunodeficiency 
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 HP:0003011 Abnormality of musculature "Abnormality originating in one or more muscles." [HPO:curators]
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 HP:0003198 Myopathy 
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 HP:0003236 Elevated serum creatine phosphokinase 
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 HP:0003326 Myalgia "A tendency to experience muscle pain." [HPO:curators]
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 HP:0003388 Easy fatigability 
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 HP:0003394 Muscle cramps 
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 HP:0003458 EMG myopathic abnormalities "The presence of abnormal electromyographic patterns indicative of myopathy, such as small-short polyphasic motor unit potentials." [HPO:curators]
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 HP:0003552 Muscle stiffness 
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 HP:0003554 Type 2 muscle fiber atrophy "Atrophy (wasting) affecting primary type 2 muscle fibers. This feature in general can only be observed on muscle biopsy." [HPO:curators]
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 HP:0003557 Increased variability in muscle fiber size "An abnormally high degree of muscle fiber size variation. This phenotypic feature can be observed upon muscle biopsy." [HPO:curators]
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 HP:0003581 Onset in adulthood 
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 HP:0003677 Slow progression 
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 HP:0003687 Centralized nuclei 
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 HP:0003701 Proximal muscle weakness "A lack of strength of the proximal muscles." [HPO:curators]
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 HP:0003738 Exercise-induced myalgia "The occurrence of an unusually high amount of muscle pain following exercise." [HPO:curators]
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 HP:0003828 Variable expressivity 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0007126 Proximal amyotrophy "Amyotrophy (muscular atrophy) affecting the proximal musculature." [HPO:curators]
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 HP:0007676 Hypoplasia of the iris 
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 HP:0008064 Ichthyosiform abnormality of the skin 
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 HP:0009005 Weakness of the intrinsic hand muscles 
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 HP:0009046 Difficulty walking, running, climbing stairs 
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 HP:0030200 Fatiguable weakness of proximal limb muscles "A type of weakness of a skeletal muscle of proximal part of a limb that occurs after a muscle group is used and lessens if the muscle group has some rest. That is, there is diminution of strength with repetitive muscle actions." [UK:rheller]
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 HP:0100301 Muscle fiber tubular inclusions "Unusual regions of densely packed membranous tubules known as tubular aggregates which present as membranous inclusions, derived from membranes of sarcoplasmic reticulum and mitochondria, containing miscellaneous proteins with a variety of enzymatic activities." [HPO:sdoelken, PMID:15113116]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000123104 ITPR2 / Q14571 / inositol 1,4,5-trisphosphate receptor type 2  / reaction
 ENSG00000144935 TRPC1 / P48995 / transient receptor potential cation channel subfamily C member 1  / reaction / complex
 ENSG00000167323 STIM1 / Q13586 / stromal interaction molecule 1  / reaction / complex
 ENSG00000150995 ITPR1 / Q14643 / inositol 1,4,5-trisphosphate receptor type 1  / reaction
 ENSG00000096433 ITPR3 / Q14573 / inositol 1,4,5-trisphosphate receptor type 3  / reaction
 ENSG00000276045 ORAI1 / Q96D31 / ORAI calcium release-activated calcium modulator 1  / complex / reaction






 

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