ENSG00000175467


Homo sapiens

Features
Gene ID: ENSG00000175467
  
Biological name :SART1
  
Synonyms : O43290 / SART1 / SART1, U4/U6.U5 tri-snRNP-associated protein 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: 1
Band: q13.1
Gene start: 65961689
Gene end: 65979828
  
Corresponding Affymetrix probe sets: 200051_at (Human Genome U133 Plus 2.0 Array)   231998_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000436218
Ensembl peptide - ENSP00000310448
NCBI entrez gene - 9092     See in Manteia.
OMIM - 605941
RefSeq - XM_011545345
RefSeq - NM_005146
RefSeq - XM_011545344
RefSeq Peptide - NP_005137
swissprot - O43290
swissprot - E9PQI8
Ensembl - ENSG00000175467
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sart1ENSDARG00000005945Danio rerio
 Sart1ENSMUSG00000039148Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR005011  SNU66/SART1 family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000387 spliceosomal snRNP assembly TAS
 biological_processGO:0000398 mRNA splicing, via spliceosome IEA
 biological_processGO:0000481 maturation of 5S rRNA IBA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0045292 mRNA cis splicing, via spliceosome IBA
 biological_processGO:0045585 positive regulation of cytotoxic T cell differentiation IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005681 spliceosomal complex IEA
 cellular_componentGO:0005737 cytoplasm TAS
 cellular_componentGO:0005794 Golgi apparatus IDA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0015030 Cajal body IDA
 cellular_componentGO:0016607 nuclear speck IDA
 cellular_componentGO:0046540 U4/U6 x U5 tri-snRNP complex IBA
 cellular_componentGO:0071013 catalytic step 2 spliceosome IDA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr