ENSG00000186001


Homo sapiens

Features
Gene ID: ENSG00000186001
  
Biological name :LRCH3
  
Synonyms : leucine rich repeats and calponin homology domain containing 3 / LRCH3 / Q96II8
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: 1
Band: q29
Gene start: 197791226
Gene end: 197888436
  
Corresponding Affymetrix probe sets: 1553668_at (Human Genome U133 Plus 2.0 Array)   1559490_at (Human Genome U133 Plus 2.0 Array)   214739_at (Human Genome U133 Plus 2.0 Array)   228119_at (Human Genome U133 Plus 2.0 Array)   229387_at (Human Genome U133 Plus 2.0 Array)   235347_at (Human Genome U133 Plus 2.0 Array)   240926_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000400164
Ensembl peptide - ENSP00000412975
Ensembl peptide - ENSP00000334375
Ensembl peptide - ENSP00000393579
Ensembl peptide - ENSP00000394609
Ensembl peptide - ENSP00000394763
Ensembl peptide - ENSP00000394965
Ensembl peptide - ENSP00000395309
Ensembl peptide - ENSP00000399751
NCBI entrez gene - 84859     See in Manteia.
RefSeq - XM_017007352
RefSeq - XM_006713791
RefSeq - XM_006713792
RefSeq - XM_006713793
RefSeq - XM_011513242
RefSeq - XM_011513243
RefSeq - XM_017007350
RefSeq - XM_017007351
RefSeq - NM_032773
RefSeq - XM_005269362
RefSeq - XM_005269363
RefSeq - XM_005269365
RefSeq - XM_005269367
RefSeq Peptide - NP_116162
swissprot - H7C0F9
swissprot - H7C0J8
swissprot - F8WFB5
swissprot - E9PD99
swissprot - Q96II8
swissprot - H7C1G3
Ensembl - ENSG00000186001
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lrch3ENSDARG00000100679Danio rerio
 LRCH3ENSGALG00000007595Gallus gallus
 Lrch3ENSMUSG00000022801Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LRCH1 / Q9Y2L9 / leucine rich repeats and calponin homology domain containing 1ENSG0000013614140
LRCH2 / Q5VUJ6 / leucine rich repeats and calponin homology domain containing 2ENSG0000013022439
LRCH4 / O75427 / leucine rich repeats and calponin homology domain containing 4ENSG0000007745438
PIDD1 / Q9HB75 / p53-induced death domain protein 1ENSG0000017759519
LRRC28 / Q86X40 / leucine rich repeat containing 28ENSG0000016890413
LRRC69 / Q6ZNQ3 / leucine rich repeat containing 69ENSG0000021495412
LRRC8E / Q6NSJ5 / leucine rich repeat containing 8 VRAC subunit EENSG0000017101711
LRRC8A / Q8IWT6 / leucine rich repeat containing 8 VRAC subunit AENSG0000013680211
LRRC8B / Q6P9F7 / leucine rich repeat containing 8 VRAC subunit BENSG0000019714711
LRRC2 / Q9BYS8 / leucine rich repeat containing 2ENSG0000016382710
LRSAM1 / Q6UWE0 / leucine rich repeat and sterile alpha motif containing 1ENSG0000014835610
LRRC39 / Q96DD0 / leucine rich repeat containing 39ENSG0000012247710
LRRC8D / Q7L1W4 / leucine rich repeat containing 8 VRAC subunit DENSG0000017149210
LRRC8C / Q8TDW0 / leucine rich repeat containing 8 VRAC subunit CENSG000001714889
LRRC18 / Q8N456 / leucine rich repeat containing 18ENSG000001653838
LRRC57 / Q8N9N7 / leucine rich repeat containing 57ENSG000001809798
RSU1 / Q15404 / Ras suppressor protein 1ENSG000001484846
AC093423.3ENSG000002719490


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR001715  Calponin homology domain
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily
 IPR036872  CH domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IBA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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