19883


Mus musculus (NCBI)

Features
Gene ID: 19883
  
Biological name :
  
Synonyms : 9530021D13Rik|Nr1f1|ROR1|ROR2|ROR3|nmf267|sg|staggerer|tmgc26 / RAR-related orphan receptor alpha / Rora
  
Possible biological names infered from orthology :
  
Species: Mus musculus (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 1420583_a_at (Mouse Genome 430 2.0 Array)   1424034_at (Mouse Genome 430 2.0 Array)   1424035_at (Mouse Genome 430 2.0 Array)   1436325_at (Mouse Genome 430 2.0 Array)   1436326_at (Mouse Genome 430 2.0 Array)   1441085_at (Mouse Genome 430 2.0 Array)   1455165_at (Mouse Genome 430 2.0 Array)   1458129_at (Mouse Genome 430 2.0 Array)   1458145_at (Mouse Genome 430 2.0 Array)   
  
Cross references: RefSeq - 1039792391
RefSeq - 568960885
RefSeq - 568960887
RefSeq - 568960891
RefSeq - 583966058
RefSeq - 583966108
RefSeq - 7305439
RefSeq - 755529826
RefSeq - NC_000075.6
RefSeq - NP_001276845.1
RefSeq - NP_001276846.1
RefSeq - NP_038674.1
RefSeq - XP_006510940.1
RefSeq - XP_006510941.1
RefSeq - XP_006510943.1
RefSeq - XP_011240984.1
RefSeq - XP_017168708.1
RefSeq - XM_006510880.1
RefSeq - NM_001289916.1
RefSeq - NM_001289917.1
RefSeq - NM_013646.2
RefSeq - XM_011242682.2
RefSeq - XM_017313219.1
RefSeq - XR_001778824.1
RefSeq - XM_006510877.3
RefSeq - XM_006510878.2
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSMUSG00000032238 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001525 angiogenesis ISO
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated ISO
 biological_processGO:0006805 xenobiotic metabolic process IMP
 biological_processGO:0006809 nitric oxide biosynthetic process IMP
 biological_processGO:0008589 regulation of smoothened signaling pathway IMP
 biological_processGO:0010575 positive regulation of vascular endothelial growth factor production ISO
 biological_processGO:0010906 regulation of glucose metabolic process IMP
 biological_processGO:0019218 regulation of steroid metabolic process IMP
 biological_processGO:0021702 cerebellar Purkinje cell differentiation IMP
 biological_processGO:0021930 cerebellar granule cell precursor proliferation IMP
 biological_processGO:0030522 intracellular receptor signaling pathway ISO
 biological_processGO:0032922 circadian regulation of gene expression IDA
 biological_processGO:0036315 cellular response to sterol ISO
 biological_processGO:0042632 cholesterol homeostasis IMP
 biological_processGO:0042692 muscle cell differentiation ISO
 biological_processGO:0042752 regulation of circadian rhythm IMP
 biological_processGO:0042753 positive regulation of circadian rhythm IDA
 biological_processGO:0043030 regulation of macrophage activation IMP
 biological_processGO:0043124 negative regulation of I-kappaB kinase/NF-kappaB signaling ISO
 biological_processGO:0045599 negative regulation of fat cell differentiation IMP
 biological_processGO:0045893 positive regulation of transcription, DNA-templated ISO
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II ISO
 biological_processGO:0046068 cGMP metabolic process IMP
 biological_processGO:0048511 rhythmic process IEA
 biological_processGO:0050728 negative regulation of inflammatory response ISO
 biological_processGO:0060850 regulation of transcription involved in cell fate commitment IMP
 biological_processGO:0070328 triglyceride homeostasis ISO
 biological_processGO:0071347 cellular response to interleukin-1 IDA
 biological_processGO:0071356 cellular response to tumor necrosis factor IDA
 biological_processGO:0071456 cellular response to hypoxia ISO
 biological_processGO:0072539 T-helper 17 cell differentiation IMP
 cellular_componentGO:0005634 nucleus ISO
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding ISO
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding ISO
 molecular_functionGO:0001222 transcription corepressor binding ISO
 molecular_functionGO:0001223 transcription coactivator binding ISO
 molecular_functionGO:0003677 DNA binding ISO
 molecular_functionGO:0003700 DNA-binding transcription factor activity ISO
 molecular_functionGO:0003707 steroid hormone receptor activity IEA
 molecular_functionGO:0004879 nuclear receptor activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008013 beta-catenin binding IPI
 molecular_functionGO:0008134 transcription factor binding ISO
 molecular_functionGO:0008142 oxysterol binding ISO
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding ISS
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0098531 transcription factor activity, direct ligand regulated sequence-specific DNA binding ISO


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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