20591


Mus musculus (NCBI)

Features
Gene ID: 20591
  
Biological name :
  
Synonyms : D930009K15Rik|Jarid1c|Smcx|mKIAA0234 / Kdm5c / lysine (K)-specific demethylase 5C
  
Possible biological names infered from orthology :
  
Species: Mus musculus (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 1419813_at (Mouse Genome 430 2.0 Array)   1426497_at (Mouse Genome 430 2.0 Array)   1426498_at (Mouse Genome 430 2.0 Array)   1441449_at (Mouse Genome 430 2.0 Array)   1441450_s_at (Mouse Genome 430 2.0 Array)   1444157_a_at (Mouse Genome 430 2.0 Array)   1444158_at (Mouse Genome 430 2.0 Array)   1457930_at (Mouse Genome 430 2.0 Array)   
  
Cross references: RefSeq - 1039796753
RefSeq - 1039796761
RefSeq - 165905607
RefSeq - 569011831
RefSeq - 569011833
RefSeq - 569011835
RefSeq - 569011837
RefSeq - 569011839
RefSeq - 569011841
RefSeq - NC_000086.7
RefSeq - NP_038696.2
RefSeq - XP_006528832.1
RefSeq - XP_006528833.1
RefSeq - XP_006528834.1
RefSeq - XP_006528835.1
RefSeq - XP_006528836.1
RefSeq - XP_006528837.1
RefSeq - XP_017173931.1
RefSeq - XP_017173932.1
RefSeq - NM_013668.4
RefSeq - XM_017318443.1
RefSeq - XM_006528769.3
RefSeq - XM_006528770.3
RefSeq - XM_006528771.3
RefSeq - XM_006528772.3
RefSeq - XM_006528773.3
RefSeq - XM_006528774.3
RefSeq - XM_017318442.1
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSMUSG00000025332 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II ISO
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0034720 histone H3-K4 demethylation ISO
 biological_processGO:0042752 regulation of circadian rhythm NAS
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IDA
 biological_processGO:0048511 rhythmic process IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005654 nucleoplasm ISO
 cellular_componentGO:0005737 cytoplasm ISO
 cellular_componentGO:0005829 cytosol ISO
 cellular_componentGO:0035097 histone methyltransferase complex IBA
 molecular_functionGO:0001085 RNA polymerase II transcription factor binding ISO
 molecular_functionGO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003682 chromatin binding IBA
 molecular_functionGO:0008270 zinc ion binding ISO
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0032452 histone demethylase activity IBA
 molecular_functionGO:0032453 histone demethylase activity (H3-K4 specific) ISO
 molecular_functionGO:0034647 histone demethylase activity (H3-trimethyl-K4 specific) IBA
 molecular_functionGO:0035064 methylated histone binding IBA
 molecular_functionGO:0042802 identical protein binding ISO
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0051213 dioxygenase activity IEA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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