21425


Mus musculus (NCBI)
regulationresponsednabindingactivityimmunedna-templatedrnapolymeraseiiautophagydefensebacteriumfactorproximalpromotersequence-specificproteinembryonicplacentadevelopmentadaptiveprocesshumorallysosomeorganizationgram-negativeincompatibleinteraction

Features
Gene ID: 21425
  
Biological name :
  
Synonyms : Tcfeb|bHLHe35 / Tfeb / transcription factor EB
  
Possible biological names infered from orthology :
  
Species: Mus musculus (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 1422566_at (Mouse Genome 430 2.0 Array)   
  
Cross references: RefSeq - XP_006524070.1
RefSeq - 239835746
RefSeq - 239835748
RefSeq - 568999734
RefSeq - 568999738
RefSeq - 568999740
RefSeq - 755556316
RefSeq - NC_000083.6
RefSeq - NP_001155194.1
RefSeq - NP_001155195.1
RefSeq - NP_035679.3
RefSeq - XP_006524066.2
RefSeq - XP_006524067.1
RefSeq - XP_006524069.1
RefSeq - 239835744
RefSeq - NM_001161722.1
RefSeq - NM_001161723.1
RefSeq - NM_011549.3
RefSeq - XM_006524004.1
RefSeq - XM_006524006.3
RefSeq - XM_006524007.3
RefSeq - XM_006524003.3
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSMUSG00000023990 to get all the annotations available for this gene.


Gene Ontology (GO)
anatomical structure developmentimmune responsenitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcatabolic processprocess utilizing autophagic mechanismcellular component organizationresponse to stressresponse to external stimulusresponse to biotic stimulusanatomical structure developmentimmune responsenitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcatabolic processprocess utilizing autophagic mechanismcellular component organizationresponse to stressresponse to external stimulusresponse to biotic stimulusanatomical structure developmentimmune responsenitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcatabolic processprocess utilizing autophagic mechanismcellular component organizationresponse to stressresponse to external stimulusresponse to biotic stimulusanatomical structure developmentimmune responsenitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcatabolic processprocess utilizing autophagic mechanismcellular component organizationresponse to stressresponse to external stimulusresponse to biotic stimulusanatomical structure developmentimmune responsenitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcatabolic processprocess utilizing autophagic mechanismcellular component organizationresponse to stressresponse to external stimulusresponse to biotic stimulusanatomical structure developmentimmune responsenitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcatabolic processprocess utilizing autophagic mechanismcellular component organizationresponse to stressresponse to external stimulusresponse to biotic stimulusanatomical structure developmentimmune responsenitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcatabolic processprocess utilizing autophagic mechanismcellular component organizationresponse to stressresponse to external stimulusresponse to biotic stimulusanatomical structure developmentimmune responsenitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcatabolic processprocess utilizing autophagic mechanismcellular component organizationresponse to stressresponse to external stimulusresponse to biotic stimulusanatomical structure developmentimmune responsenitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcatabolic processprocess utilizing autophagic mechanismcellular component organizationresponse to stressresponse to external stimulusresponse to biotic stimulusanatomical structure developmentimmune responsenitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcatabolic processprocess utilizing autophagic mechanismcellular component organizationresponse to stressresponse to external stimulusresponse to biotic stimulusanatomicalanatomical structure developmentimmune resimmune responsenitrogen cnitrogen compound metabolic processbiosynthetbiosynthetic processcellular mcellular metabolic processprimary meprimary metabolic processorganic suorganic substance metabolic processcatabolic catabolic processprocess utprocess utilizing autophagic mechanismcellular ccellular component organizationresponse tresponse to stressresponse tresponse to external stimulusresponse tresponse to biotic stimulus
organic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityprotein bindingorganic cyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor acDNA-binding transcription factor activityprotein bindingprotein binding
cellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellcellorganelleorganellemembrane-enclosed lumenmembrane-enclosed lumenprotein-containing complexprotein-containing complex
TypeGO IDTermEv.Code
 biological_processGO:0001892 embryonic placenta development IMP
 biological_processGO:0002250 adaptive immune response IEA
 biological_processGO:0002376 immune system process IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006914 autophagy IEA
 biological_processGO:0006959 humoral immune response IMP
 biological_processGO:0007040 lysosome organization ISO
 biological_processGO:0010508 positive regulation of autophagy ISO
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IDA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II ISO
 biological_processGO:0050829 defense response to Gram-negative bacterium IMP
 biological_processGO:1902477 regulation of defense response to bacterium, incompatible interaction IMP
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005654 nucleoplasm ISO
 cellular_componentGO:0005667 transcription factor complex IDA
 cellular_componentGO:0005737 cytoplasm ISO
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IDA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IDA
 molecular_functionGO:0003677 DNA binding IDA
 molecular_functionGO:0003700 DNA-binding transcription factor activity ISO
 molecular_functionGO:0044212 transcription regulatory region DNA binding ISO
 molecular_functionGO:0046982 protein heterodimerization activity IPI
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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