23028


Homo sapiens (NCBI)

Features
Gene ID: 23028
  
Biological name :
  
Synonyms : AOF2|BHC110|CPRF|KDM1|LSD1 / KDM1A / lysine demethylase 1A
  
Possible biological names infered from orthology :
  
Species: Homo sapiens (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 212348_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: RefSeq - XP_016856206.1
RefSeq - 1034556770
RefSeq - 1391723818
RefSeq - 530360925
RefSeq - 578798679
RefSeq - 578798681
RefSeq - 578798683
RefSeq - 58761544
RefSeq - 58761546
RefSeq - NC_000001.11
RefSeq - NG_047129.1
RefSeq - NP_001009999.1
RefSeq - NP_001350583.1
RefSeq - NP_055828.2
RefSeq - XP_005245843.1
RefSeq - XP_006710535.1
RefSeq - XP_006710536.1
RefSeq - XP_006710537.1
RefSeq - XP_016856205.1
RefSeq - 1034556768
RefSeq - NM_001009999.2
RefSeq - NM_001363654.1
RefSeq - NM_015013.3
RefSeq - XM_006710474.3
RefSeq - XM_017000716.1
RefSeq - XM_017000717.1
RefSeq - XM_005245786.2
RefSeq - XM_006710472.3
RefSeq - XM_006710473.3
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSG00000004487 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II ISS
 biological_processGO:0000380 alternative mRNA splicing, via spliceosome IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IMP
 biological_processGO:0006482 protein demethylation IMP
 biological_processGO:0007596 blood coagulation TAS
 biological_processGO:0010569 regulation of double-strand break repair via homologous recombination IMP
 biological_processGO:0010976 positive regulation of neuron projection development IEA
 biological_processGO:0016575 histone deacetylation IEA
 biological_processGO:0021987 cerebral cortex development IEA
 biological_processGO:0032091 negative regulation of protein binding IMP
 biological_processGO:0033169 histone H3-K9 demethylation IDA
 biological_processGO:0033184 positive regulation of histone ubiquitination IMP
 biological_processGO:0034644 cellular response to UV IDA
 biological_processGO:0034720 histone H3-K4 demethylation IDA
 biological_processGO:0035563 positive regulation of chromatin binding IEA
 biological_processGO:0042551 neuron maturation IEA
 biological_processGO:0043392 negative regulation of DNA binding IC
 biological_processGO:0043433 negative regulation of DNA-binding transcription factor activity IMP
 biological_processGO:0043518 negative regulation of DNA damage response, signal transduction by p53 class mediator IMP
 biological_processGO:0045793 positive regulation of cell size IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IDA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IDA
 biological_processGO:0046098 guanine metabolic process IEA
 biological_processGO:0051091 positive regulation of DNA-binding transcription factor activity IDA
 biological_processGO:0055001 muscle cell development ISS
 biological_processGO:0055114 oxidation-reduction process IEA
 biological_processGO:0060992 response to fungicide IEA
 biological_processGO:0071320 cellular response to cAMP IEA
 biological_processGO:0071480 cellular response to gamma radiation IMP
 biological_processGO:1902166 negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator IMP
 biological_processGO:1903827 regulation of cellular protein localization IMP
 cellular_componentGO:0000784 nuclear chromosome, telomeric region IDA
 cellular_componentGO:0000790 nuclear chromatin ISS
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005667 transcription factor complex ISS
 cellular_componentGO:0032991 protein-containing complex IDA
 cellular_componentGO:1990391 DNA repair complex IDA
 molecular_functionGO:0002039 p53 binding IPI
 molecular_functionGO:0003682 chromatin binding IDA
 molecular_functionGO:0004407 histone deacetylase activity TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008134 transcription factor binding IDA
 molecular_functionGO:0016491 oxidoreductase activity IDA
 molecular_functionGO:0019899 enzyme binding IPI
 molecular_functionGO:0030374 nuclear receptor transcription coactivator activity IMP
 molecular_functionGO:0032451 demethylase activity IMP
 molecular_functionGO:0032452 histone demethylase activity TAS
 molecular_functionGO:0032453 histone demethylase activity (H3-K4 specific) IDA
 molecular_functionGO:0032454 histone demethylase activity (H3-K9 specific) TAS
 molecular_functionGO:0034648 histone demethylase activity (H3-dimethyl-K4 specific) IDA
 molecular_functionGO:0042162 telomeric DNA binding IMP
 molecular_functionGO:0043426 MRF binding IDA
 molecular_functionGO:0044212 transcription regulatory region DNA binding ISS
 molecular_functionGO:0050660 flavin adenine dinucleotide binding IDA
 molecular_functionGO:0050681 androgen receptor binding IDA
 molecular_functionGO:0061752 telomeric repeat-containing RNA binding IDA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr