25836


Homo sapiens (NCBI)

Features
Gene ID: 25836
  
Biological name :
  
Synonyms : CDLS|CDLS1|IDN3|IDN3-B|Scc2 / NIPBL / NIPBL, cohesin loading factor
  
Possible biological names infered from orthology :
  
Species: Homo sapiens (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 207108_s_at (Human Genome U133 Plus 2.0 Array)   212469_at (Human Genome U133 Plus 2.0 Array)   212483_at (Human Genome U133 Plus 2.0 Array)   213918_s_at (Human Genome U133 Plus 2.0 Array)   242352_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: RefSeq - 1034644501
RefSeq - 1034644503
RefSeq - 1034644505
RefSeq - 1034644507
RefSeq - 47578105
RefSeq - 47578107
RefSeq - 530378760
RefSeq - 578809901
RefSeq - 578809903
RefSeq - 767934368
RefSeq - NC_000005.10
RefSeq - NG_006987.1
RefSeq - NP_056199.2
RefSeq - NP_597677.2
RefSeq - XP_005248337.1
RefSeq - XP_005248339.3
RefSeq - XP_006714530.1
RefSeq - XP_006714531.1
RefSeq - XP_011512317.1
RefSeq - XP_016864818.1
RefSeq - XP_016864819.1
RefSeq - XP_016864820.1
RefSeq - NM_015384.4
RefSeq - NM_133433.3
RefSeq - XM_017009330.2
RefSeq - XM_017009331.1
RefSeq - XM_005248280.3
RefSeq - XM_005248282.5
RefSeq - XM_006714467.2
RefSeq - XM_006714468.2
RefSeq - XM_011514015.1
RefSeq - XM_017009329.1
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSG00000164190 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IDA
 biological_processGO:0001656 metanephros development NAS
 biological_processGO:0003007 heart morphogenesis IMP
 biological_processGO:0003151 outflow tract morphogenesis IMP
 biological_processGO:0006302 double-strand break repair IBA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006974 cellular response to DNA damage stimulus IMP
 biological_processGO:0007064 mitotic sister chromatid cohesion IMP
 biological_processGO:0007076 mitotic chromosome condensation IBA
 biological_processGO:0007420 brain development IMP
 biological_processGO:0007507 heart development IBA
 biological_processGO:0007605 sensory perception of sound IMP
 biological_processGO:0019827 stem cell population maintenance IEA
 biological_processGO:0031065 positive regulation of histone deacetylation IDA
 biological_processGO:0034087 establishment of mitotic sister chromatid cohesion IBA
 biological_processGO:0034088 maintenance of mitotic sister chromatid cohesion IMP
 biological_processGO:0034613 cellular protein localization IMP
 biological_processGO:0035115 embryonic forelimb morphogenesis IMP
 biological_processGO:0035136 forelimb morphogenesis IMP
 biological_processGO:0035261 external genitalia morphogenesis IMP
 biological_processGO:0040018 positive regulation of multicellular organism growth IEA
 biological_processGO:0042471 ear morphogenesis IMP
 biological_processGO:0042634 regulation of hair cycle IMP
 biological_processGO:0045444 fat cell differentiation IEA
 biological_processGO:0045778 positive regulation of ossification IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IDA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0045995 regulation of embryonic development IMP
 biological_processGO:0048557 embryonic digestive tract morphogenesis IMP
 biological_processGO:0048565 digestive tract development IBA
 biological_processGO:0048589 developmental growth IMP
 biological_processGO:0048592 eye morphogenesis IMP
 biological_processGO:0048638 regulation of developmental growth IMP
 biological_processGO:0048703 embryonic viscerocranium morphogenesis IEA
 biological_processGO:0050890 cognition IMP
 biological_processGO:0060325 face morphogenesis IMP
 biological_processGO:0061010 gall bladder development IMP
 biological_processGO:0061038 uterus morphogenesis IMP
 biological_processGO:0070550 rDNA condensation IBA
 biological_processGO:0071169 establishment of protein localization to chromatin IBA
 biological_processGO:0071481 cellular response to X-ray IMP
 biological_processGO:0071733 transcriptional activation by promoter-enhancer looping IBA
 biological_processGO:0071921 cohesin loading IDA
 biological_processGO:1905406 positive regulation of mitotic cohesin loading IBA
 biological_processGO:1990414 replication-born double-strand break repair via sister chromatid exchange IBA
 biological_processGO:2001224 positive regulation of neuron migration ISS
 cellular_componentGO:0000228 nuclear chromosome IBA
 cellular_componentGO:0000785 chromatin IEA
 cellular_componentGO:0000790 nuclear chromatin IBA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0032039 integrator complex ISS
 cellular_componentGO:0032116 SMC loading complex IDA
 cellular_componentGO:0070062 extracellular exosome HDA
 cellular_componentGO:0090694 Scc2-Scc4 cohesin loading complex IDA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008022 protein C-terminus binding IPI
 molecular_functionGO:0036033 mediator complex binding IEA
 molecular_functionGO:0042826 histone deacetylase binding IPI
 molecular_functionGO:0047485 protein N-terminus binding IPI
 molecular_functionGO:0070087 chromo shadow domain binding IPI


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr