260440


Danio rerio (NCBI)

Features
Gene ID: 260440
  
Biological name :
  
Synonyms : atp2a1 / ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 / cb279|serca|serca1|wu:cegs655|wu:fb17h11|wu:fb19b10|zgc:92110
  
Possible biological names infered from orthology :
  
Species: Danio rerio (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: Dr.20010.7.S1_at (Zebrafish Array)   
  
Cross references: RefSeq - 55741944
RefSeq - NC_007114.7
RefSeq - NP_001007030.1
RefSeq - NM_001007029.1
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSDARG00000020574 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006816 calcium ion transport IEA
 biological_processGO:0006874 cellular calcium ion homeostasis IMP
 biological_processGO:0006937 regulation of muscle contraction IMP
 biological_processGO:0006942 regulation of striated muscle contraction ISS
 biological_processGO:0009612 response to mechanical stimulus IMP
 biological_processGO:0031448 positive regulation of fast-twitch skeletal muscle fiber contraction ISS
 biological_processGO:0045932 negative regulation of muscle contraction IMP
 biological_processGO:0045988 negative regulation of striated muscle contraction ISS
 biological_processGO:0070588 calcium ion transmembrane transport IBA
 biological_processGO:0090076 relaxation of skeletal muscle IMP
 cellular_componentGO:0005789 endoplasmic reticulum membrane ISS
 cellular_componentGO:0005793 endoplasmic reticulum-Golgi intermediate compartment ISS
 cellular_componentGO:0016020 membrane ISS
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016529 sarcoplasmic reticulum ISS
 cellular_componentGO:0031673 H zone ISS
 cellular_componentGO:0031674 I band ISS
 cellular_componentGO:0033017 sarcoplasmic reticulum membrane IBA
 cellular_componentGO:0048471 perinuclear region of cytoplasm ISS
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005388 calcium-transporting ATPase activity ISS
 molecular_functionGO:0005509 calcium ion binding ISS
 molecular_functionGO:0005524 ATP binding ISS
 molecular_functionGO:0008553 proton-exporting ATPase activity, phosphorylative mechanism IBA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016887 ATPase activity ISS


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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