393900


Danio rerio (NCBI)

Features
Gene ID: 393900
  
Biological name :
  
Synonyms : ercc2 / excision repair cross-complementation group 2 / XPD|zgc:56365
  
Possible biological names infered from orthology :
  
Species: Danio rerio (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: Dr.5152.1.S1_at (Zebrafish Array)   
  
Cross references: RefSeq - 820948158
RefSeq - NC_007126.7
RefSeq - NP_957220.2
RefSeq - NM_200926.2
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSDARG00000021985 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000019 regulation of mitotic recombination IBA
 biological_processGO:0000717 nucleotide-excision repair, DNA duplex unwinding IBA
 biological_processGO:0006139 nucleobase-containing compound metabolic process IEA
 biological_processGO:0006289 nucleotide-excision repair IEA
 biological_processGO:0006366 transcription by RNA polymerase II IBA
 biological_processGO:0006979 response to oxidative stress IBA
 biological_processGO:0009411 response to UV IBA
 biological_processGO:0033683 nucleotide-excision repair, DNA incision IBA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IBA
 biological_processGO:0045951 positive regulation of mitotic recombination IBA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003684 damaged DNA binding IBA
 molecular_functionGO:0004003 ATP-dependent DNA helicase activity IEA
 molecular_functionGO:0004386 helicase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008026 ATP-dependent helicase activity IEA
 molecular_functionGO:0008353 RNA polymerase II carboxy-terminal domain kinase activity IBA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEA
 molecular_functionGO:0043141 ATP-dependent 5"-3" DNA helicase activity IBA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr