3978


Homo sapiens (NCBI)

Features
Gene ID: 3978
  
Biological name :
  
Synonyms : DNA ligase 1 / LIG1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 202726_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: RefSeq - 1005261057
RefSeq - 1005261059
RefSeq - 1370475146
RefSeq - 4557719
RefSeq - 574274721
RefSeq - 574274815
RefSeq - NC_000019.10
RefSeq - NG_007395.1
RefSeq - NP_000225.1
RefSeq - NP_001275992.1
RefSeq - NP_001275993.1
RefSeq - NP_001307899.1
RefSeq - NP_001307900.1
RefSeq - XP_024307281.1
RefSeq - NR_135501.1
RefSeq - XM_024451513.1
RefSeq - XR_002958316.1
RefSeq - XR_002958315.1
RefSeq - NR_110296.1
RefSeq - NR_135497.1
RefSeq - NR_135498.1
RefSeq - NR_135499.1
RefSeq - NM_000234.2
RefSeq - NM_001289063.1
RefSeq - NM_001289064.1
RefSeq - NM_001320970.1
RefSeq - NM_001320971.1
RefSeq - NR_135500.1
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSG00000105486 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006266 DNA ligation TAS
 biological_processGO:0006273 lagging strand elongation IBA
 biological_processGO:0006281 DNA repair TAS
 biological_processGO:0006283 transcription-coupled nucleotide-excision repair TAS
 biological_processGO:0006284 base-excision repair IDA
 biological_processGO:0006297 nucleotide-excision repair, DNA gap filling TAS
 biological_processGO:0006298 mismatch repair TAS
 biological_processGO:0009653 anatomical structure morphogenesis TAS
 biological_processGO:0033151 V(D)J recombination IDA
 biological_processGO:0051103 DNA ligation involved in DNA repair IBA
 biological_processGO:0051301 cell division IEA
 biological_processGO:0071897 DNA biosynthetic process IEA
 biological_processGO:1903461 Okazaki fragment processing involved in mitotic DNA replication IBA
 cellular_componentGO:0005634 nucleus TAS
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005739 mitochondrion IBA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003909 DNA ligase activity TAS
 molecular_functionGO:0003910 DNA ligase (ATP) activity IBA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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