53817


Mus musculus (NCBI)

Features
Gene ID: 53817
  
Biological name :
  
Synonyms : 0610030D10Rik|AI428441|Bat-1|Bat1|Bat1a|D17H6S81E|D17H6S81E-1|D6S81Eh / Ddx39b / DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
  
Possible biological names infered from orthology :
  
Species: Mus musculus (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 1437367_at (Mouse Genome 430 2.0 Array)   1437984_x_at (Mouse Genome 430 2.0 Array)   1447779_x_at (Mouse Genome 430 2.0 Array)   1448221_at (Mouse Genome 430 2.0 Array)   
  
Cross references: RefSeq - NT_187027.1
RefSeq - 9790069
RefSeq - NC_000083.6
RefSeq - NT_187004.1
RefSeq - 356995868
RefSeq - NP_001239386.1
RefSeq - NP_062667.1
RefSeq - NT_039662.3
RefSeq - NM_001252457.1
RefSeq - NM_019693.3
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSMUSG00000019432 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000245 spliceosomal complex assembly ISO
 biological_processGO:0000398 mRNA splicing, via spliceosome ISO
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0006406 mRNA export from nucleus ISO
 biological_processGO:0008380 RNA splicing ISO
 biological_processGO:0010501 RNA secondary structure unwinding ISO
 biological_processGO:0032786 positive regulation of DNA-templated transcription, elongation ISO
 biological_processGO:0045727 positive regulation of translation ISO
 biological_processGO:0046784 viral mRNA export from host cell nucleus ISO
 biological_processGO:0051028 mRNA transport IEA
 biological_processGO:0061051 positive regulation of cell growth involved in cardiac muscle cell development ISO
 biological_processGO:1904707 positive regulation of vascular smooth muscle cell proliferation ISO
 biological_processGO:2000002 negative regulation of DNA damage checkpoint ISO
 biological_processGO:2000573 positive regulation of DNA biosynthetic process ISO
 cellular_componentGO:0000346 transcription export complex ISO
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005681 spliceosomal complex ISO
 cellular_componentGO:0005687 U4 snRNP ISO
 cellular_componentGO:0005688 U6 snRNP ISO
 cellular_componentGO:0005737 cytoplasm ISO
 cellular_componentGO:0016363 nuclear matrix ISO
 cellular_componentGO:0016607 nuclear speck ISO
 cellular_componentGO:0032991 protein-containing complex ISO
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0004004 ATP-dependent RNA helicase activity ISO
 molecular_functionGO:0004386 helicase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008186 RNA-dependent ATPase activity ISO
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016887 ATPase activity ISO
 molecular_functionGO:0017070 U6 snRNA binding ISO
 molecular_functionGO:0030621 U4 snRNA binding ISO
 molecular_functionGO:0042802 identical protein binding ISO
 molecular_functionGO:0043008 ATP-dependent protein binding ISO
 molecular_functionGO:0044877 protein-containing complex binding ISO


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr