546


Homo sapiens (NCBI)

Features
Gene ID: 546
  
Biological name :
  
Synonyms : ATRX / ATRX, chromatin remodeler / JMS|MRX52|RAD54|RAD54L|XH2|XNP|ZNF-HX
  
Possible biological names infered from orthology :
  
Species: Homo sapiens (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 208859_s_at (Human Genome U133 Plus 2.0 Array)   208860_s_at (Human Genome U133 Plus 2.0 Array)   208861_s_at (Human Genome U133 Plus 2.0 Array)   211022_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: RefSeq - 578838413
RefSeq - 1034674578
RefSeq - 1034674581
RefSeq - 1034674583
RefSeq - 1034674585
RefSeq - 1034674588
RefSeq - 1034674590
RefSeq - 1034674593
RefSeq - 1034674595
RefSeq - 1034674597
RefSeq - 1034674599
RefSeq - 530788276
RefSeq - 530788278
RefSeq - 578838407
RefSeq - 578838409
RefSeq - 578838411
RefSeq - 1034674574
RefSeq - 578838415
RefSeq - 578838417
RefSeq - 578838419
RefSeq - 578838421
RefSeq - NC_000023.11
RefSeq - NG_008838.3
RefSeq - NP_000480.3
RefSeq - NP_612114.2
RefSeq - XP_005262210.2
RefSeq - XP_005262211.2
RefSeq - XP_005262212.2
RefSeq - XP_005262213.2
RefSeq - XP_005262214.2
RefSeq - XP_006724729.1
RefSeq - XP_006724730.1
RefSeq - XP_006724731.1
RefSeq - XP_016885090.1
RefSeq - XP_016885091.1
RefSeq - XP_016885092.1
RefSeq - XP_016885093.1
RefSeq - XP_016885094.1
RefSeq - XP_016885095.1
RefSeq - XP_016885096.1
RefSeq - XP_016885097.1
RefSeq - XP_016885098.1
RefSeq - XP_016885099.1
RefSeq - XP_016885100.1
RefSeq - XM_017029609.1
RefSeq - XM_017029610.1
RefSeq - NM_000489.5
RefSeq - NM_138270.3
RefSeq - NM_138271.1
RefSeq - XM_017029611.1
RefSeq - XR_001755700.2
RefSeq - XM_005262153.5
RefSeq - XM_005262154.5
RefSeq - XM_005262155.4
RefSeq - XM_005262156.4
RefSeq - XM_005262157.5
RefSeq - XM_006724666.4
RefSeq - XM_006724667.3
RefSeq - XM_006724668.3
RefSeq - XM_017029601.2
RefSeq - XM_017029602.1
RefSeq - XM_017029603.1
RefSeq - XM_017029604.2
RefSeq - XM_017029605.1
RefSeq - XM_017029606.2
RefSeq - XM_017029607.2
RefSeq - XM_017029608.2
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSG00000085224 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000212 meiotic spindle organization IEA
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006306 DNA methylation TAS
 biological_processGO:0006310 DNA recombination TAS
 biological_processGO:0006334 nucleosome assembly IDA
 biological_processGO:0006336 DNA replication-independent nucleosome assembly IMP
 biological_processGO:0006338 chromatin remodeling IDA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated TAS
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0010571 positive regulation of nuclear cell cycle DNA replication ISS
 biological_processGO:0030330 DNA damage response, signal transduction by p53 class mediator ISS
 biological_processGO:0030900 forebrain development IEA
 biological_processGO:0031297 replication fork processing ISS
 biological_processGO:0032206 positive regulation of telomere maintenance ISS
 biological_processGO:0032508 DNA duplex unwinding IEA
 biological_processGO:0035128 post-embryonic forelimb morphogenesis IEA
 biological_processGO:0035264 multicellular organism growth IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IMP
 biological_processGO:0060009 Sertoli cell development IEA
 biological_processGO:0070192 chromosome organization involved in meiotic cell cycle IEA
 biological_processGO:0070198 protein localization to chromosome, telomeric region ISS
 biological_processGO:0072520 seminiferous tubule development IEA
 biological_processGO:0072711 cellular response to hydroxyurea ISS
 biological_processGO:1900112 regulation of histone H3-K9 trimethylation IMP
 biological_processGO:1901581 negative regulation of telomeric RNA transcription from RNA pol II promoter ISS
 biological_processGO:1901582 positive regulation of telomeric RNA transcription from RNA pol II promoter IMP
 biological_processGO:1904908 negative regulation of maintenance of mitotic sister chromatid cohesion, telomeric IMP
 cellular_componentGO:0000780 condensed nuclear chromosome, centromeric region IEA
 cellular_componentGO:0000784 nuclear chromosome, telomeric region ISS
 cellular_componentGO:0005634 nucleus TAS
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005720 nuclear heterochromatin TAS
 cellular_componentGO:0005721 pericentric heterochromatin ISS
 cellular_componentGO:0016604 nuclear body IDA
 cellular_componentGO:0016605 PML body ISS
 cellular_componentGO:0031618 nuclear pericentric heterochromatin IEA
 cellular_componentGO:0031933 telomeric heterochromatin ISS
 cellular_componentGO:1990707 nuclear subtelomeric heterochromatin IDA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding ISA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003678 DNA helicase activity TAS
 molecular_functionGO:0003682 chromatin binding IDA
 molecular_functionGO:0004386 helicase activity TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0015616 DNA translocase activity IDA
 molecular_functionGO:0035064 methylated histone binding IDA
 molecular_functionGO:0042393 histone binding IDA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0070087 chromo shadow domain binding IPI


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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