54790


Homo sapiens (NCBI)

Features
Gene ID: 54790
  
Biological name :
  
Synonyms : KIAA1546|MDS / TET2 / tet methylcytosine dioxygenase 2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 1569385_s_at (Human Genome U133 Plus 2.0 Array)   227624_at (Human Genome U133 Plus 2.0 Array)   235461_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: RefSeq - 578809189
RefSeq - NC_000004.12
RefSeq - XP_005263139.1
RefSeq - XP_006714305.1
RefSeq - XP_016863808.1
RefSeq - XP_024309870.1
RefSeq - XP_024309871.1
RefSeq - NG_028191.1
RefSeq - 116063558
RefSeq - 1370487101
RefSeq - NP_001120680.1
RefSeq - 1034640229
RefSeq - NP_060098.3
RefSeq - 1370487103
RefSeq - 187761317
RefSeq - 530377868
RefSeq - XR_938747.3
RefSeq - NM_001127208.2
RefSeq - NM_017628.4
RefSeq - XM_005263082.3
RefSeq - XM_006714242.3
RefSeq - XM_017008319.1
RefSeq - XM_024454102.1
RefSeq - XM_024454103.1
RefSeq - XR_001741246.1
RefSeq - XR_244633.3
RefSeq - XR_427546.4
RefSeq - XR_938746.2
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSG00000168769 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006211 5-methylcytosine catabolic process IDA
 biological_processGO:0006493 protein O-linked glycosylation IMP
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0014070 response to organic cyclic compound IEA
 biological_processGO:0030099 myeloid cell differentiation IMP
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IMP
 biological_processGO:0055114 oxidation-reduction process IEA
 biological_processGO:0070989 oxidative demethylation IBA
 biological_processGO:0080111 DNA demethylation IDA
 biological_processGO:0080182 histone H3-K4 trimethylation IMP
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0005506 iron ion binding IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008198 ferrous iron binding IDA
 molecular_functionGO:0008270 zinc ion binding IDA
 molecular_functionGO:0070579 methylcytosine dioxygenase activity ISS


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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