556995


Danio rerio (NCBI)

Features
Gene ID: 556995
  
Biological name :
  
Synonyms : lig1 / ligase I, DNA, ATP-dependent / si:dkeyp-35b8.5|si:dkeyp-35b8.7|wu:fc54a11
  
Possible biological names infered from orthology :
  
Species: Danio rerio (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: Dr.6786.1.A1_at (Zebrafish Array)   
  
Cross references: RefSeq - 187608350
RefSeq - NC_007113.7
RefSeq - NP_001119860.1
RefSeq - NW_018394512.1
RefSeq - NW_018395223.1
RefSeq - NM_001126388.1
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSDARG00000060041 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006260 DNA replication IEA
 biological_processGO:0006273 lagging strand elongation IBA
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006310 DNA recombination IEA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0051103 DNA ligation involved in DNA repair IEA
 biological_processGO:0071897 DNA biosynthetic process IEA
 biological_processGO:1903461 Okazaki fragment processing involved in mitotic DNA replication IBA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005739 mitochondrion IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003909 DNA ligase activity IEA
 molecular_functionGO:0003910 DNA ligase (ATP) activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016874 ligase activity IEA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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