557500


Danio rerio (NCBI)

Features
Gene ID: 557500
  
Biological name :
  
Synonyms : fxrbeta|gb:dq017614 / nr1h5 / nuclear receptor subfamily 1, group H, member 5
  
Possible biological names infered from orthology :
  
Species: Danio rerio (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: Dr.16428.1.A1_at (Zebrafish Array)   
  
Cross references: RefSeq - 528486968
RefSeq - XP_005166790.1
RefSeq - NC_007119.7
RefSeq - 181330416
RefSeq - NP_001116713.1
RefSeq - NM_001123241.1
RefSeq - XM_005166733.4
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSDARG00000031046 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IBA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006629 lipid metabolic process IBA
 biological_processGO:0007275 multicellular organism development IBA
 biological_processGO:0030154 cell differentiation IBA
 biological_processGO:0033993 response to lipid IBA
 biological_processGO:0042632 cholesterol homeostasis IBA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IBA
 biological_processGO:0055088 lipid homeostasis IBA
 biological_processGO:0071222 cellular response to lipopolysaccharide IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0090575 RNA polymerase II transcription factor complex IBA
 molecular_functionGO:0000976 transcription regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0001076 transcription factor activity, RNA polymerase II transcription factor binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0003707 steroid hormone receptor activity IEA
 molecular_functionGO:0004879 nuclear receptor activity IBA
 molecular_functionGO:0008134 transcription factor binding IBA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0008289 lipid binding IBA
 molecular_functionGO:0030374 nuclear receptor transcription coactivator activity IBA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0098531 transcription factor activity, direct ligand regulated sequence-specific DNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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