564511


Danio rerio (NCBI)

Features
Gene ID: 564511
  
Biological name :
  
Synonyms : NR1I1-B|VDRbeta|gb:dq017633 / vdrb / vitamin D receptor b
  
Possible biological names infered from orthology :
  
Species: Danio rerio (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets:
  
Cross references: RefSeq - XP_005166104.1
RefSeq - 528482916
RefSeq - NC_007117.7
RefSeq - NW_018394660.1
RefSeq - 229606097
RefSeq - NP_001153457.1
RefSeq - NM_001159985.1
RefSeq - XM_005166047.4
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSDARG00000070721 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001947 heart looping IMP
 biological_processGO:0003146 heart jogging IMP
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IBA
 biological_processGO:0009887 animal organ morphogenesis IBA
 biological_processGO:0030154 cell differentiation IBA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IBA
 biological_processGO:0060119 inner ear receptor cell development IMP
 biological_processGO:0060429 epithelium development IBA
 biological_processGO:0071599 otic vesicle development IMP
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0090575 RNA polymerase II transcription factor complex IBA
 molecular_functionGO:0000976 transcription regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0001076 transcription factor activity, RNA polymerase II transcription factor binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0003707 steroid hormone receptor activity IEA
 molecular_functionGO:0004879 nuclear receptor activity IBA
 molecular_functionGO:0005499 vitamin D binding IBA
 molecular_functionGO:0008134 transcription factor binding IBA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0008434 calcitriol receptor activity IEA
 molecular_functionGO:0030374 nuclear receptor transcription coactivator activity IBA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0070644 vitamin D response element binding IDA
 molecular_functionGO:0098531 transcription factor activity, direct ligand regulated sequence-specific DNA binding IBA
 molecular_functionGO:1902098 calcitriol binding IBA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr