565400


Danio rerio (NCBI)

Features
Gene ID: 565400
  
Biological name :
  
Synonyms : msh3 / mutS homolog 3 (E. coli) / si:dkey-56d12.1
  
Possible biological names infered from orthology :
  
Species: Danio rerio (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets:
  
Cross references: RefSeq - XP_017211629.1
RefSeq - 157841276
RefSeq - 688556811
RefSeq - 688556814
RefSeq - NC_007116.7
RefSeq - NW_018394611.1
RefSeq - XP_009300056.1
RefSeq - XP_009300057.1
RefSeq - 1040690176
RefSeq - NP_001103184.1
RefSeq - NM_001109714.1
RefSeq - XM_009301782.3
RefSeq - XM_017356140.2
RefSeq - XM_009301781.3
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSDARG00000063276 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000710 meiotic mismatch repair IBA
 biological_processGO:0000735 removal of nonhomologous ends IBA
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006298 mismatch repair IEA
 biological_processGO:0006312 mitotic recombination IBA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0007131 reciprocal meiotic recombination IBA
 biological_processGO:0016447 somatic recombination of immunoglobulin gene segments IBA
 biological_processGO:0043111 replication fork arrest IBA
 biological_processGO:0043570 maintenance of DNA repeat elements IBA
 biological_processGO:0051096 positive regulation of helicase activity IBA
 cellular_componentGO:0032300 mismatch repair complex IBA
 cellular_componentGO:0032302 MutSbeta complex IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0000403 Y-form DNA binding IBA
 molecular_functionGO:0000404 heteroduplex DNA loop binding IBA
 molecular_functionGO:0000406 double-strand/single-strand DNA junction binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003684 damaged DNA binding IBA
 molecular_functionGO:0003697 single-stranded DNA binding IBA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008094 DNA-dependent ATPase activity IBA
 molecular_functionGO:0019237 centromeric DNA binding IBA
 molecular_functionGO:0030983 mismatched DNA binding IEA
 molecular_functionGO:0032142 single guanine insertion binding IBA
 molecular_functionGO:0032181 dinucleotide repeat insertion binding IBA
 molecular_functionGO:0032357 oxidized purine DNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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