570158


Danio rerio (NCBI)
activitymrnanucleusoxidativernaoxidoreductasedonorsincorporationoxygenoneresponsehypoxiaprocessingexportspermatogenesissingle-strandeddemethylationoxidation-reductionprocessnuclearspeckactingpairedreductionmolecular-oxoglutaratedonoratomdemethylasemetal

Features
Gene ID: 570158
  
Biological name :
  
Synonyms : alkbh5 / alkB homolog 5, RNA demethylase / zgc:154076
  
Possible biological names infered from orthology :
  
Species: Danio rerio (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: Dr.13995.1.A1_at (Zebrafish Array)   
  
Cross references: RefSeq - 116517268
RefSeq - NC_007112.7
RefSeq - NP_001070855.1
RefSeq - NM_001077387.1
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSDARG00000063003 to get all the annotations available for this gene.


Gene Ontology (GO)
response to stressresponse to abiotic stimulusnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processmacromolecule localizationestablishment of localizationcellular localizationprotein-containing complex localizationmulticellular organism reproductiondemethylationoxidation-reduction processresponse to stressresponse to abiotic stimulusnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processmacromolecule localizationestablishment of localizationcellular localizationprotein-containing complex localizationmulticellular organism reproductiondemethylationoxidation-reduction processresponse to stressresponse to abiotic stimulusnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processmacromolecule localizationestablishment of localizationcellular localizationprotein-containing complex localizationmulticellular organism reproductiondemethylationoxidation-reduction processresponse to stressresponse to abiotic stimulusnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processmacromolecule localizationestablishment of localizationcellular localizationprotein-containing complex localizationmulticellular organism reproductiondemethylationoxidation-reduction processresponse to stressresponse to abiotic stimulusnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processmacromolecule localizationestablishment of localizationcellular localizationprotein-containing complex localizationmulticellular organism reproductiondemethylationoxidation-reduction processresponse to stressresponse to abiotic stimulusnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processmacromolecule localizationestablishment of localizationcellular localizationprotein-containing complex localizationmulticellular organism reproductiondemethylationoxidation-reduction processresponse to stressresponse to abiotic stimulusnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processmacromolecule localizationestablishment of localizationcellular localizationprotein-containing complex localizationmulticellular organism reproductiondemethylationoxidation-reduction processresponse to stressresponse to abiotic stimulusnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processmacromolecule localizationestablishment of localizationcellular localizationprotein-containing complex localizationmulticellular organism reproductiondemethylationoxidation-reduction processresponse to stressresponse to abiotic stimulusnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processmacromolecule localizationestablishment of localizationcellular localizationprotein-containing complex localizationmulticellular organism reproductiondemethylationoxidation-reduction processresponse to stressresponse to abiotic stimulusnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processmacromolecule localizationestablishment of localizationcellular localizationprotein-containing complex localizationmulticellular organism reproductiondemethylationoxidation-reduction processresponse tresponse to stressresponse tresponse to abiotic stimulusnitrogen cnitrogen compound metabolic processcellular mcellular metabolic processprimary meprimary metabolic processorganic suorganic substance metabolic processmacromolecmacromolecule localizationestablishmestablishment of localizationcellular lcellular localizationprotein-coprotein-containing complex localizationmulticellumulticellular organism reproductiondemethylatdemethylationoxidation-oxidation-reduction process
oxidoreductase activitydemethylase activitycatalytic activity, acting on RNAion bindingoxidoreductase activitydemethylase activitycatalytic activity, acting on RNAion bindingoxidoreductase activitydemethylase activitycatalytic activity, acting on RNAion bindingoxidoreductase activitydemethylase activitycatalytic activity, acting on RNAion bindingoxidoreductase activitydemethylase activitycatalytic activity, acting on RNAion bindingoxidoreductase activitydemethylase activitycatalytic activity, acting on RNAion bindingoxidoreductase activitydemethylase activitycatalytic activity, acting on RNAion bindingoxidoreductase activitydemethylase activitycatalytic activity, acting on RNAion bindingoxidoreductase activitydemethylase activitycatalytic activity, acting on RNAion bindingoxidoreductase activitydemethylase activitycatalytic activity, acting on RNAion bindingoxidoreductase activityoxidoreductase activitydemethylase activitydemethylase activitycatalytic activity, acting on RNAcatalytic activity, acting on RNAion bindingion binding
cellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellcellorganelleorganellemembrane-enclosed lumenmembrane-enclosed lumen
TypeGO IDTermEv.Code
 biological_processGO:0001666 response to hypoxia ISS
 biological_processGO:0006397 mRNA processing ISS
 biological_processGO:0006406 mRNA export from nucleus ISS
 biological_processGO:0007283 spermatogenesis ISS
 biological_processGO:0035553 oxidative single-stranded RNA demethylation ISS
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0016607 nuclear speck ISS
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors ISS
 molecular_functionGO:0035515 oxidative RNA demethylase activity ISS
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0051213 dioxygenase activity IEA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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