6597


Homo sapiens (NCBI)

Features
Gene ID: 6597
  
Biological name :
  
Synonyms : BAF190|BAF190A|BRG1|CSS4|MRD16|RTPS2|SNF2|SNF2L4|SNF2LB|SWI2|hSNF2b / SMARCA4 / SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
  
Possible biological names infered from orthology :
  
Species: Homo sapiens (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 1569073_x_at (Human Genome U133 Plus 2.0 Array)   208793_x_at (Human Genome U133 Plus 2.0 Array)   208794_s_at (Human Genome U133 Plus 2.0 Array)   212520_s_at (Human Genome U133 Plus 2.0 Array)   213719_s_at (Human Genome U133 Plus 2.0 Array)   213720_s_at (Human Genome U133 Plus 2.0 Array)   214360_at (Human Genome U133 Plus 2.0 Array)   214728_x_at (Human Genome U133 Plus 2.0 Array)   215714_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: RefSeq - 192807320
RefSeq - 1370475709
RefSeq - 1370475711
RefSeq - 1370475713
RefSeq - 1370475715
RefSeq - 1370475717
RefSeq - 1370475719
RefSeq - 1370475721
RefSeq - 1370475723
RefSeq - 1370475725
RefSeq - 192807312
RefSeq - 192807314
RefSeq - 192807316
RefSeq - 192807318
RefSeq - 1370475707
RefSeq - 192807323
RefSeq - 21071056
RefSeq - 578833496
RefSeq - 578833498
RefSeq - 768003541
RefSeq - NC_000019.10
RefSeq - NG_011556.2
RefSeq - NP_001122316.1
RefSeq - NP_001122317.1
RefSeq - NP_001122318.1
RefSeq - NP_001122319.1
RefSeq - NP_001122320.1
RefSeq - NP_001122321.1
RefSeq - NP_003063.2
RefSeq - XP_006722908.1
RefSeq - XP_006722909.1
RefSeq - XP_011526500.1
RefSeq - XP_024307426.1
RefSeq - XP_024307427.1
RefSeq - XP_024307428.1
RefSeq - XP_024307429.1
RefSeq - XP_024307430.1
RefSeq - XP_024307431.1
RefSeq - XP_024307432.1
RefSeq - XP_024307433.1
RefSeq - XP_024307434.1
RefSeq - XP_024307435.1
RefSeq - NM_001128844.1
RefSeq - NM_001128845.1
RefSeq - NM_001128846.1
RefSeq - NM_001128847.1
RefSeq - NM_001128848.1
RefSeq - NM_001128849.1
RefSeq - NM_003072.3
RefSeq - XM_024451661.1
RefSeq - XM_024451662.1
RefSeq - XM_024451663.1
RefSeq - XM_024451664.1
RefSeq - XM_024451665.1
RefSeq - XM_024451666.1
RefSeq - XM_024451667.1
RefSeq - XM_006722845.2
RefSeq - XM_006722846.2
RefSeq - XM_011528198.1
RefSeq - XM_024451658.1
RefSeq - XM_024451659.1
RefSeq - XM_024451660.1
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSG00000127616 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II TAS
 biological_processGO:0001188 RNA polymerase I transcriptional preinitiation complex assembly IEA
 biological_processGO:0003407 neural retina development IEP
 biological_processGO:0006325 chromatin organization TAS
 biological_processGO:0006337 nucleosome disassembly IDA
 biological_processGO:0006338 chromatin remodeling IMP
 biological_processGO:0006357 regulation of transcription by RNA polymerase II NAS
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0030177 positive regulation of Wnt signaling pathway IMP
 biological_processGO:0030308 negative regulation of cell growth IMP
 biological_processGO:0038111 interleukin-7-mediated signaling pathway TAS
 biological_processGO:0043044 ATP-dependent chromatin remodeling HDA
 biological_processGO:0043923 positive regulation by host of viral transcription IMP
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IMP
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IMP
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IGI
 biological_processGO:0051091 positive regulation of DNA-binding transcription factor activity IDA
 biological_processGO:0060766 negative regulation of androgen receptor signaling pathway IMP
 biological_processGO:1901838 positive regulation of transcription of nucleolar large rRNA by RNA polymerase I IMP
 biological_processGO:1902661 positive regulation of glucose mediated signaling pathway IDA
 biological_processGO:1902895 positive regulation of pri-miRNA transcription by RNA polymerase II IMP
 biological_processGO:1904837 beta-catenin-TCF complex assembly TAS
 cellular_componentGO:0000790 nuclear chromatin IDA
 cellular_componentGO:0005615 extracellular space HDA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0016514 SWI/SNF complex IDA
 cellular_componentGO:0032991 protein-containing complex HDA
 cellular_componentGO:0071564 npBAF complex ISS
 cellular_componentGO:0071565 nBAF complex ISS
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding HDA
 molecular_functionGO:0000980 RNA polymerase II distal enhancer sequence-specific DNA binding HDA
 molecular_functionGO:0001164 RNA polymerase I CORE element sequence-specific DNA binding IDA
 molecular_functionGO:0002039 p53 binding IPI
 molecular_functionGO:0003713 transcription coactivator activity NAS
 molecular_functionGO:0003714 transcription corepressor activity IDA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0004386 helicase activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008094 DNA-dependent ATPase activity IGI
 molecular_functionGO:0008134 transcription factor binding IPI
 molecular_functionGO:0030957 Tat protein binding IPI
 molecular_functionGO:0031492 nucleosomal DNA binding HDA
 molecular_functionGO:0047485 protein N-terminus binding IPI
 molecular_functionGO:0050681 androgen receptor binding IPI
 molecular_functionGO:0070182 DNA polymerase binding IPI
 molecular_functionGO:0070577 lysine-acetylated histone binding IDA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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