ENSDARG00000000943


Danio rerio

Features
Gene ID: ENSDARG00000000943
  
Biological name :dzip1
  
Synonyms : DAZ interacting zinc finger protein 1 / dzip1
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 7249531
Gene end: 7280299
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000105423
Ensembl peptide - ENSDARP00000143508
Ensembl peptide - ENSDARP00000114860
Ensembl peptide - ENSDARP00000049694
Ensembl peptide - ENSDARP00000077859
NCBI entrez gene - 402875     See in Manteia.
RefSeq - NM_001001501
RefSeq - NM_001312898
RefSeq Peptide - NP_001001501
RefSeq Peptide - NP_001299827
swissprot - E9QDX2
swissprot - E9QBJ9
swissprot - F1QHQ9
swissprot - F1QNW2
ZFIN ID - ZDB-GENE-040526-1
Ensembl - ENSDARG00000000943
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
dzip1l / DAZ interacting zinc finger protein 1-like / Q499E4* / Q8IYY4* / Zinc finger protein DZIP1L *ENSDARG0000007426524


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR032714  Zinc finger protein DZIP1, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000001 Kupffer s vesicle Kupffers vesicle motile cilium decreased length , abnormal
Kupffers vesicle motile cilium decreased amount , abnormal
Kupffers vesicle cilium decreased amount , abnormal
Show

 ZFA:0000008 brain brain quality , abnormal
brain cell morphology , abnormal
Show

 ZFA:0000022 floor plate floor plate motile cilium decreased amount , abnormal
floor plate decreased size , abnormal
floor plate patchy , abnormal
floor plate absent , abnormal
floor plate has fewer parts of type floor plate motile cilium, abnormal
Show

 ZFA:0000035 lens lens increased amount , abnormal
lens mislocalised , abnormal
Show

 ZFA:0000051 otic vesicle otic vesicle motile cilium absent , abnormal
Show

 ZFA:0000095 pharyngeal arch 3-7 skeleton pharyngeal arch 3-7 skeleton quality , abnormal
Show

 ZFA:0000107 eye eye decreased distance eye , abnormal
eye mislocalised medially , abnormal
Show

 ZFA:0000150 pronephric duct pronephric duct motile cilium decreased amount , abnormal
pronephric duct cilium decreased amount , abnormal
Show

 ZFA:0000155 somite somite U-shaped , abnormal
somite hemorrhagic , abnormal
Show

 ZFA:0000164 ventral mesenchyme ventral mesenchyme physical object quality , abnormal
Show

 ZFA:0000396 nervous system nervous system quality , abnormal
Show

 ZFA:0000737 cranium cranium hemorrhagic , abnormal
Show

 ZFA:0000938 central canal central canal decreased size , abnormal
Show

 ZFA:0000944 posterior lateral line posterior lateral line molecular quality , abnormal
Show

 ZFA:0001054 lateral dorsal aorta lateral dorsal aorta decreased diameter , abnormal
Show

 ZFA:0001089 myoseptum myoseptum posterior region morphology , abnormal
Show

 ZFA:0001094 whole organism whole organism lethal (sensu genetics) , abnormal
whole organism cilium absent , abnormal
whole organism axoneme absent , abnormal
whole organism motile cilium absent , abnormal
whole organism shape , abnormal
whole organism cilium decreased amount , abnormal
Show

 ZFA:0001117 post-vent region post-vent region curved , abnormal
post-vent region curved ventral , abnormal
Show

 ZFA:0001135 neural tube neural tube quality , abnormal
Show

 ZFA:0001267 cranial vasculature cranial vasculature hemorrhagic , abnormal
Show

 ZFA:0001282 adenohypophysis adenohypophysis aplastic , abnormal
Show

 ZFA:0001405 ethmoid cartilage ethmoid cartilage hypoplastic , abnormal
Show

 ZFA:0001423 parachordal cartilage parachordal cartilage fused with parachordal cartilage , abnormal
Show

 ZFA:0001424 chondrocranium chondrocranium morphology , abnormal
Show

 ZFA:0001507 trabecula cranii trabecula cranii morphology , abnormal
Show

 ZFA:0001617 otolith otolith deformed , abnormal
Show

 ZFA:0001672 dorsolateral septum dorsolateral septum aplastic , abnormal
Show

 ZFA:0005003 pharyngeal vasculature pharyngeal vasculature hemorrhagic , abnormal
Show

 ZFA:0009003 cranial neural crest cell cranial neural crest cell mislocalised ventrally , abnormal
Show

 ZFA:0009121 auditory receptor cell auditory receptor cell kinocilium absent , abnormal
Show

 ZFA:0009310 retinal ganglion cell retinal ganglion cell axon misrouted , abnormal
retinal ganglion cell axon ipsilateral to eye , abnormal
retinal ganglion cell axon displaced to diencephalon , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr