ENSDARG00000001057


Danio rerio

Features
Gene ID: ENSDARG00000001057
  
Biological name :bysl
  
Synonyms : bysl / bystin-like
  
Possible biological names infered from orthology : Bystin / O54825 / Q13895
  
Species: Danio rerio
  
Chr. number: 22
Strand: -1
Band:
Gene start: 550828
Gene end: 557965
  
Corresponding Affymetrix probe sets: Dr.4025.1.A1_at (Zebrafish Array)   NM_201106_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000001346
NCBI entrez gene - 394081     See in Manteia.
RefSeq - NM_201106
RefSeq Peptide - NP_957400
swissprot - F1R7L3
ZFIN ID - ZDB-GENE-040426-1287
Ensembl - ENSDARG00000001057
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BYSLENSGALG00000003467Gallus gallus
 BYSLENSG00000112578Homo sapiens
 ByslENSMUSG00000023988Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007955  Bystin


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain quality , abnormal
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 ZFA:0000012 central nervous system central nervous system necrotic , abnormal
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 ZFA:0000029 hindbrain hindbrain anterior/posterior pattern specification disrupted , abnormal
hindbrain radial glial cell morphology , abnormal
hindbrain quality , abnormal
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 ZFA:0000042 midbrain hindbrain boundary midbrain hindbrain boundary decreased thickness , abnormal
midbrain hindbrain boundary condensed , abnormal
midbrain hindbrain boundary quality , abnormal
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 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000084 yolk yolk circular , abnormal
yolk grey , abnormal
yolk quality , abnormal
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 ZFA:0000106 extension extension decreased thickness , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000109 forebrain forebrain pointed , abnormal
forebrain commissural neuron axon guidance disrupted , abnormal
forebrain quality , abnormal
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 ZFA:0000110 fourth ventricle fourth ventricle distended , abnormal
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 ZFA:0000112 gut gut hypoplastic , abnormal
gut quality , abnormal
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 ZFA:0000114 heart heart quality , abnormal
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 ZFA:0000123 liver liver hypoplastic , abnormal
liver quality , abnormal
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 ZFA:0000396 nervous system nervous system quality , abnormal
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 ZFA:0000435 cranial nerve II cranial nerve II absent , abnormal
cranial nerve II decreased thickness , abnormal
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 ZFA:0001094 whole organism whole organism shape , abnormal
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 ZFA:0001114 head head decreased size , abnormal
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 ZFA:0001115 trunk trunk decreased thickness , abnormal
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 ZFA:0001439 anatomical system anatomical system quality , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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