ENSDARG00000001721


Danio rerio

Features
Gene ID: ENSDARG00000001721
  
Biological name :oc90
  
Synonyms : oc90 / otoconin 90
  
Possible biological names infered from orthology : AC100868.1 / Mus musculus otoconin 90 (Oc90), transcript variant 2, mRNA. / Q02509 / Q9Z0L3
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 42942552
Gene end: 42960353
  
Corresponding Affymetrix probe sets: Dr.8453.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000089075
Ensembl peptide - ENSDARP00000118251
Ensembl peptide - ENSDARP00000113486
NCBI entrez gene - 568941     See in Manteia.
RefSeq - NM_001080192
RefSeq Peptide - NP_001073661
swissprot - E9QJQ8
swissprot - E9QJK8
swissprot - F1QH90
ZFIN ID - ZDB-GENE-070912-300
Ensembl - ENSDARG00000001721
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000030128Gallus gallus
 AC100868.1ENSG00000258417Homo sapiens
 OC90ENSG00000253117Homo sapiens
 Oc90ENSMUSG00000015001Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pla2g1b / phospholipase A2, group IB (pancreas) / Q9Z0Y2* / P04054* / Phospholipase A2 * / phospholipase A2 group IB*ENSDARG000000091534
zgc:92162 / O15496* / Q9QXX3* / PLA2G10* / phospholipase A2 group X*ENSDARG000000993444


Protein motifs (from Interpro)
Interpro ID Name
 IPR001211  Phospholipase A2
 IPR016090  Phospholipase A2 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006644 phospholipid metabolic process IEA
 biological_processGO:0016042 lipid catabolic process IEA
 biological_processGO:0048840 otolith development IMP
 biological_processGO:0050482 arachidonic acid secretion IEA
 cellular_componentGO:0005576 extracellular region IEA
 molecular_functionGO:0004623 phospholipase A2 activity IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000559 otolith organ otolith organ has fewer parts of type otolith , abnormal
otolith organ altered number of otolith , abnormal
Show

 ZFA:0001114 head head decreased size , abnormal
Show

 ZFA:0001617 otolith otolith decreased size , abnormal
otolith aplastic , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr