ENSDARG00000002391


Danio rerio

Features
Gene ID: ENSDARG00000002391
  
Biological name :tlcd1
  
Synonyms : tlcd1 / TLC domain containing 1
  
Possible biological names infered from orthology : Calfacilitin / Q96CP7 / Q99JT6
  
Species: Danio rerio
  
Chr. number: 21
Strand: -1
Band:
Gene start: 26080215
Gene end: 26089964
  
Corresponding Affymetrix probe sets: Dr.1228.1.A1_at (Zebrafish Array)   NM_001006071_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000009170
NCBI entrez gene - 450051     See in Manteia.
RefSeq - NM_001006071
RefSeq Peptide - NP_001006071
swissprot - F1QSW8
ZFIN ID - ZDB-GENE-041010-173
Ensembl - ENSDARG00000002391
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TLCD1ENSGALG00000003973Gallus gallus
 TLCD1ENSG00000160606Homo sapiens
 Tlcd1ENSMUSG00000019437Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tlcd2 / A8WGS4 / TLC domain containing 2 / Q8VC26* / A6NGC4* / TLC domain-containing protein 2 *ENSDARG0000007739635


Protein motifs (from Interpro)
Interpro ID Name
 IPR006634  TRAM/LAG1/CLN8 homology domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr