ENSDARG00000002406


Danio rerio

Features
Gene ID: ENSDARG00000002406
  
Biological name :zmynd10
  
Synonyms : F1QN74 / zinc finger, MYND-type containing 10 / zmynd10
  
Possible biological names infered from orthology : O75800 / Q99ML0 / zinc finger, MYND domain containing 10
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 22691256
Gene end: 22703383
  
Corresponding Affymetrix probe sets: Dr.15433.1.A1_at (Zebrafish Array)   NM_200397_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000006141
NCBI entrez gene - 393368     See in Manteia.
RefSeq - NM_200397
RefSeq Peptide - NP_956691
swissprot - F1QN74
ZFIN ID - ZDB-GENE-040426-1218
Ensembl - ENSDARG00000002406
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ZMYND10ENSGALG00000035883Gallus gallus
 O75800ENSG00000004838Homo sapiens
 Q99ML0ENSMUSG00000010044Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002893  Zinc finger, MYND-type
 IPR017333  Uncharacterised conserved protein UCP037948, zinc finger MYND-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0036158 outer dynein arm assembly ISS
 biological_processGO:0036159 inner dynein arm assembly ISS
 biological_processGO:0044458 motile cilium assembly ISS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005815 microtubule organizing center IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0034451 centriolar satellite ISS
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000048 olfactory placode olfactory placode cilium paralysed , abnormal
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 ZFA:0000151 pronephros pronephros cilium partially paralysed , abnormal
Show

 ZFA:0001557 pronephric glomerulus pronephric glomerulus cystic , abnormal
Show

 ZFA:0001558 pronephric tubule pronephric tubule distended , abnormal
Show

 ZFA:0001617 otolith otolith increased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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