ENSDARG00000002546


Danio rerio

Features
Gene ID: ENSDARG00000002546
  
Biological name :rundc3ab
  
Synonyms : rundc3ab / RUN domain containing 3Ab
  
Possible biological names infered from orthology : O08576 / Q59EK9 / RUNDC3A / RUN domain containing 3A / RUN domain-containing protein 3A
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 9817440
Gene end: 9840819
  
Corresponding Affymetrix probe sets: Dr.11480.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000106658
Ensembl peptide - ENSDARP00000119652
NCBI entrez gene - 393118     See in Manteia.
RefSeq - NM_200149
RefSeq Peptide - NP_956443
swissprot - F1QAZ4
ZFIN ID - ZDB-GENE-040426-842
Ensembl - ENSDARG00000002546
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RUNDC3AENSGALG00000026518Gallus gallus
 Q59EK9ENSG00000108309Homo sapiens
 O08576ENSMUSG00000006575Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rundc3aa / RUN domain containing 3Aa / Q59EK9* / O08576* / RUNDC3A* / RUN domain containing 3A* / RUN domain-containing protein 3A *ENSDARG0000000724577
rundc3b / RUN domain containing 3b / Q6PDC0* / Q96NL0*ENSDARG0000000996154
rufy2 / RUN and FYVE domain containing 2 / Q8R4C2* / Q8WXA3*ENSDARG0000006201925
rufy1 / RUN and FYVE domain containing 1 / Q8BIJ7* / Q96T51* / RUN and FYVE domain-containing protein 1 *ENSDARG0000007868523
rufy3 / RUN and FYVE domain containing 3 / Q7L099*ENSDARG0000002969220


Protein motifs (from Interpro)
Interpro ID Name
 IPR004012  RUN domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr