ENSDARG00000003308


Danio rerio

Features
Gene ID: ENSDARG00000003308
  
Biological name :emc2
  
Synonyms : emc2 / ER membrane protein complex subunit 2 / Q6TGY8
  
Possible biological names infered from orthology : Q15006 / Q9CRD2
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 38659475
Gene end: 38729606
  
Corresponding Affymetrix probe sets: Dr.7383.1.S1_at (Zebrafish Array)   Dr.7383.2.A1_at (Zebrafish Array)   NM_213544_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000006378
NCBI entrez gene - 407073     See in Manteia.
RefSeq - NM_213544
RefSeq Peptide - NP_998709
swissprot - Q6TGY8
ZFIN ID - ZDB-GENE-040625-82
Ensembl - ENSDARG00000003308
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 EMC2ENSGALG00000040325Gallus gallus
 EMC2ENSG00000104412Homo sapiens
 Emc2ENSMUSG00000022337Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR019734  Tetratricopeptide repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0034975 protein folding in endoplasmic reticulum IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0005783 endoplasmic reticulum ISS
 cellular_componentGO:0072546 ER membrane protein complex ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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