ENSDARG00000003941


Danio rerio

Features
Gene ID: ENSDARG00000003941
  
Biological name :rrs1
  
Synonyms : rrs1 / RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)
  
Possible biological names infered from orthology : Q15050 / Q9CYH6 / ribosome biogenesis regulator homolog / Ribosome biosis regulatory protein homolog
  
Species: Danio rerio
  
Chr. number: 24
Strand: -1
Band:
Gene start: 23837519
Gene end: 23839647
  
Corresponding Affymetrix probe sets: Dr.7888.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000111034
NCBI entrez gene - 337399     See in Manteia.
swissprot - Q7SX91
ZFIN ID - ZDB-GENE-030131-9345
Ensembl - ENSDARG00000003941
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RRS1ENSGALG00000030890Gallus gallus
 RRS1ENSG00000179041Homo sapiens
 Rrs1ENSMUSG00000061024Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007023  Ribosomal biogenesis regulatory protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000055 ribosomal large subunit export from nucleus IBA
 biological_processGO:0000447 endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
 biological_processGO:0042254 ribosome biogenesis IEA
 biological_processGO:0042273 ribosomal large subunit biogenesis IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IBA
 cellular_componentGO:0030687 preribosome, large subunit precursor IBA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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