ENSDARG00000004131


Danio rerio

Features
Gene ID: ENSDARG00000004131
  
Biological name :rttn
  
Synonyms : rotatin / rttn
  
Possible biological names infered from orthology : Q86VV8 / Q8R4Y8
  
Species: Danio rerio
  
Chr. number: 24
Strand: -1
Band:
Gene start: 15130979
Gene end: 15263142
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000023024
Ensembl peptide - ENSDARP00000156549
Ensembl peptide - ENSDARP00000116954
Ensembl peptide - ENSDARP00000116607
NCBI entrez gene - 100151439     See in Manteia.
swissprot - E9QHG2
swissprot - E9QB45
swissprot - E7F7S8
ZFIN ID - ZDB-GENE-090609-5
Ensembl - ENSDARG00000004131
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RTTNENSGALG00000013745Gallus gallus
 RTTNENSG00000176225Homo sapiens
 RttnENSMUSG00000023066Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000225  Armadillo
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold
 IPR029249  Rotatin, N-terminal
 IPR030791  Rotatin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0044782 cilium organization IEA
 cellular_componentGO:0005813 centrosome IEA
 cellular_componentGO:0036064 ciliary basal body IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr