ENSDARG00000004460


Danio rerio

Features
Gene ID: ENSDARG00000004460
  
Biological name :desi2
  
Synonyms : desi2 / desumoylating isopeptidase 2 / Q6DC39
  
Possible biological names infered from orthology : Q9BSY9 / Q9D291
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 11550454
Gene end: 11570568
  
Corresponding Affymetrix probe sets: Dr.6944.1.A1_at (Zebrafish Array)   NM_001003532_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000137104
Ensembl peptide - ENSDARP00000033545
NCBI entrez gene - 445138     See in Manteia.
RefSeq - NM_001003532
RefSeq Peptide - NP_001003532
swissprot - A0A0R4INB8
swissprot - Q6DC39
ZFIN ID - ZDB-GENE-040801-39
Ensembl - ENSDARG00000004460
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DESI2ENSGALG00000010678Gallus gallus
 DESI2ENSG00000121644Homo sapiens
 Desi2ENSMUSG00000026502Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FP103009.1ENSDARG0000011634175


Protein motifs (from Interpro)
Interpro ID Name
 IPR008580  PPPDE putative peptidase domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0060027 convergent extension involved in gastrulation IMP
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000058 polster polster mislocalised , abnormal
Show

 ZFA:0000060 prechordal plate prechordal plate mislocalised , abnormal
Show

 ZFA:0000092 axis axis decreased length , abnormal
axis increased width , abnormal
Show

 ZFA:0000132 neural plate neural plate increased width , abnormal
Show

 ZFA:0001117 post-vent region post-vent region decreased length , abnormal
post-vent region curved ventral , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr