ENSDARG00000004874


Danio rerio

Features
Gene ID: ENSDARG00000004874
  
Biological name :spata6l
  
Synonyms : spata6l / spermatogenesis associated 6-like
  
Possible biological names infered from orthology : 4430402I18Rik / B2RV46 / Q8N4H0 / RIKEN cDNA 4430402I18 gene
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 69478914
Gene end: 69494504
  
Corresponding Affymetrix probe sets: Dr.16709.1.A1_at (Zebrafish Array)   NM_200412_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000014739
Ensembl peptide - ENSDARP00000141490
Ensembl peptide - ENSDARP00000135889
Ensembl peptide - ENSDARP00000133638
Ensembl peptide - ENSDARP00000132466
NCBI entrez gene - 393384     See in Manteia.
RefSeq - NM_200412
RefSeq Peptide - NP_956706
swissprot - A0A0R4IGK0
swissprot - A0A0R4ICP1
swissprot - F1QWX7
swissprot - A0A0R4IZ30
swissprot - A0A0R4INP9
ZFIN ID - ZDB-GENE-040426-1369
Ensembl - ENSDARG00000004874
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q8N4H0ENSG00000106686Homo sapiens
 B2RV46ENSMUSG00000064202Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
spata6 / spermatogenesis associated 6 / Q3U6K5* / Q9NWH7* / Spermatosis-associated protein 6 *ENSDARG0000002111533


Protein motifs (from Interpro)
Interpro ID Name
 IPR027208  Spermatogenesis associated 6-like protein
 IPR032732  Spermatogenesis-associated protein 6, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr