ENSDARG00000005163


Danio rerio

Features
Gene ID: ENSDARG00000005163
  
Biological name :efr3a
  
Synonyms : efr3a / EFR3 homolog A (S. cerevisiae)
  
Possible biological names infered from orthology : EFR3 homolog A / Mus musculus EFR3 homolog A (Efr3a), transcript variant 2, mRNA. / Q14156 / Q8BG67
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 42871831
Gene end: 42936509
  
Corresponding Affymetrix probe sets: Dr.14221.1.S1_at (Zebrafish Array)   NM_200827_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000035342
Ensembl peptide - ENSDARP00000135211
NCBI entrez gene - 393800     See in Manteia.
RefSeq - NM_200827
RefSeq Peptide - NP_957121
swissprot - F1QUE0
swissprot - A0A0R4II27
ZFIN ID - ZDB-GENE-040426-1681
Ensembl - ENSDARG00000005163
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 EFR3AENSGALG00000039533Gallus gallus
 EFR3AENSG00000132294Homo sapiens
 Efr3aENSMUSG00000015002Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
efr3bb / Q5SPP5 / EFR3 homolog Bb (S. cerevisiae) / EFR3B* / Q9Y2G0* / EFR3 homolog B*ENSDARG0000006931863
efr3ba / EFR3 homolog Ba (S. cerevisiae) / B * / EFR3B* / Q6ZQ18* / Q9Y2G0* / EFR3 homolog B*ENSDARG0000003351661


Protein motifs (from Interpro)
Interpro ID Name
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005575 cellular_component ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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