ENSDARG00000005254


Danio rerio

Features
Gene ID: ENSDARG00000005254
  
Biological name :kdelr2a
  
Synonyms : KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2a / kdelr2a / Q6PEH1
  
Possible biological names infered from orthology : KDEL endoplasmic reticulum protein retention receptor 2 / KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2 / KDELR2 / P33947 / Q9CQM2
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 18376269
Gene end: 18384501
  
Corresponding Affymetrix probe sets: Dr.12172.1.S1_at (Zebrafish Array)   Dr.6631.1.A1_at (Zebrafish Array)   NM_200103_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000011420
NCBI entrez gene - 373129     See in Manteia.
RefSeq - NM_200103
RefSeq Peptide - NP_956397
swissprot - Q6PEH1
ZFIN ID - ZDB-GENE-030826-32
Ensembl - ENSDARG00000005254
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 KDELR2ENSGALG00000040793Gallus gallus
 KDELR2ENSG00000136240Homo sapiens
 Kdelr2ENSMUSG00000079111Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
kdelr2b / KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2b / Q9CQM2* / KDELR2* / P33947* / KDEL endoplasmic reticulum protein retention receptor 2* / KDEL (Lys-Asp...ENSDARG0000003736196
kdelr3 / KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3 / O43731* / KDEL endoplasmic reticulum protein retention receptor 3*ENSDARG0000004091271
CABZ01075611.1 / KDELR3* / O43731* / KDEL endoplasmic reticulum protein retention receptor 3*ENSDARG0000010451949


Protein motifs (from Interpro)
Interpro ID Name
 IPR000133  ER lumen protein retaining receptor


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006621 protein retention in ER lumen IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0046923 ER retention sequence binding IEA


Pathways (from Reactome)
Pathway description
COPI-mediated anterograde transport
COPI-dependent Golgi-to-ER retrograde traffic


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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