ENSDARG00000005536


Danio rerio

Features
Gene ID: ENSDARG00000005536
  
Biological name :ubr7
  
Synonyms : ubiquitin protein ligase E3 component n-recognin 7 / ubr7
  
Possible biological names infered from orthology : AL110118.2 / Q8BU04 / Q8N806 / ubiquitin protein ligase E3 component n-recognin 7 (putative)
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 27093042
Gene end: 27107709
  
Corresponding Affymetrix probe sets: Dr.503.1.S1_at (Zebrafish Array)   NM_212629_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000019360
Ensembl peptide - ENSDARP00000127344
NCBI entrez gene - 322815     See in Manteia.
RefSeq - NM_212629
RefSeq Peptide - NP_997794
swissprot - Q5TZA5
swissprot - U3JAS5
ZFIN ID - ZDB-GENE-030131-1535
Ensembl - ENSDARG00000005536
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 UBR7ENSGALG00000010842Gallus gallus
 AL110118.2ENSG00000259066Homo sapiens
 UBR7ENSG00000012963Homo sapiens
 Ubr7ENSMUSG00000041712Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CABZ01066926.1 / UBR7* / Q8N806* / AL110118.2* / ubiquitin protein ligase E3 component n-recognin 7 (putative)*ENSDARG0000009953430


Protein motifs (from Interpro)
Interpro ID Name
 IPR003126  Zinc finger, UBR-type
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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