ENSDARG00000006235


Danio rerio

Features
Gene ID: ENSDARG00000006235
  
Biological name :brms1la
  
Synonyms : breast cancer metastasis-suppressor 1-like a / brms1la / Q4V8V1
  
Possible biological names infered from orthology : breast cancer metastasis-suppressor 1 like / Breast cancer metastasis-suppressor 1-like protein / BRMS1L / Q3U1T3 / Q5PSV4
  
Species: Danio rerio
  
Chr. number: 17
Strand: -1
Band:
Gene start: 12753579
Gene end: 12764360
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000008214
Ensembl peptide - ENSDARP00000120700
NCBI entrez gene - 792017     See in Manteia.
RefSeq - NM_001030102
RefSeq Peptide - NP_001025273
swissprot - F1QL39
swissprot - Q4V8V1
ZFIN ID - ZDB-GENE-050913-49
Ensembl - ENSDARG00000006235
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BRMS1LENSGALG00000010093Gallus gallus
 BRMS1LENSG00000100916Homo sapiens
 Brms1lENSMUSG00000012076Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
brms1lb / breast cancer metastasis-suppressor 1-like b / Q5PSV4* / BRMS1L* / Q3U1T3* / breast cancer metastasis-suppressor 1 like* / Breast cancer metastasis-suppressor 1-like protein *ENSDARG0000001804782
brms1 / breast cancer metastasis suppressor 1 / Q99N20* / Q9HCU9* / Breast cancer metastasis-suppressor 1 homolog *ENSDARG0000005195544


Protein motifs (from Interpro)
Interpro ID Name
 IPR013907  Sds3-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IBA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0016575 histone deacetylation IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0070822 Sin3-type complex IBA
 molecular_functionGO:0004407 histone deacetylase activity IBA
 molecular_functionGO:0042826 histone deacetylase binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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