ENSDARG00000006279


Danio rerio

Features
Gene ID: ENSDARG00000006279
  
Biological name :rragd
  
Synonyms : ras-related GTP binding D / rragd
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 15788100
Gene end: 15820304
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000015934
NCBI entrez gene - 570568     See in Manteia.
RefSeq - NM_001099424
RefSeq Peptide - NP_001092894
swissprot - F1QIB5
ZFIN ID - ZDB-GENE-070620-6
Ensembl - ENSDARG00000006279
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rragca / Ras-related GTP binding Ca / RRAGD* / RRAGC* / Q9NQL2* / Q9HB90* / Q99K70* / Ras related GTP binding D* / Ras related GTP binding C* / Ras-related GTP-binding protein C *ENSDARG0000006982974
rragcb / Ras-related GTP binding CbENSDARG0000009904972


Protein motifs (from Interpro)
Interpro ID Name
 IPR006762  Gtr1/RagA G protein
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009267 cellular response to starvation IBA
 biological_processGO:0010506 regulation of autophagy IBA
 biological_processGO:0032008 positive regulation of TOR signaling IBA
 biological_processGO:0071230 cellular response to amino acid stimulus IBA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005764 lysosome IBA
 cellular_componentGO:0034448 EGO complex IBA
 cellular_componentGO:1990131 Gtr1-Gtr2 GTPase complex IBA
 molecular_functionGO:0003924 GTPase activity IBA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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