ENSDARG00000006567


Danio rerio

Features
Gene ID: ENSDARG00000006567
  
Biological name :dus4l
  
Synonyms : dihydrouridine synthase 4-like (S. cerevisiae) / dus4l
  
Possible biological names infered from orthology : dihydrouridine synthase 4 like / O95620
  
Species: Danio rerio
  
Chr. number: 4
Strand: 1
Band:
Gene start: 2637947
Gene end: 2642535
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000106221
NCBI entrez gene - 445096     See in Manteia.
RefSeq - NM_001003490
RefSeq Peptide - NP_001003490
swissprot - Q5RIX6
ZFIN ID - ZDB-GENE-040801-233
Ensembl - ENSDARG00000006567
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DUS4LENSGALG00000023661Gallus gallus
 DUS4LENSG00000105865Homo sapiens
 Dus4lENSMUSG00000020648Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001269  tRNA-dihydrouridine synthase
 IPR013785  Aldolase-type TIM barrel
 IPR018517  tRNA-dihydrouridine synthase, conserved site
 IPR035587  DUS-like, FMN-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002943 tRNA dihydrouridine synthesis IEA
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0017150 tRNA dihydrouridine synthase activity IBA
 molecular_functionGO:0050660 flavin adenine dinucleotide binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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