ENSDARG00000006588


Danio rerio

Features
Gene ID: ENSDARG00000006588
  
Biological name :zgc:111983
  
Synonyms : zgc:111983
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 45173421
Gene end: 45177401
  
Corresponding Affymetrix probe sets: Dr.13439.1.S1_at (Zebrafish Array)   Dr.20125.1.A1_at (Zebrafish Array)   Dr.20125.1.A1_s_at (Zebrafish Array)   Dr.4740.1.A1_at (Zebrafish Array)   NM_001017803_at (Zebrafish Genome Array with custom cdf files)   NM_213361_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000120857
Ensembl peptide - ENSDARP00000035524
NCBI entrez gene - 550501     See in Manteia.
NCBI entrez gene - 406670     See in Manteia.
RefSeq - NM_001017803
RefSeq - NM_213361
RefSeq Peptide - NP_001017803
RefSeq Peptide - NP_998526
swissprot - Q567K3
swissprot - A2AWA2
ZFIN ID - ZDB-GENE-050417-335
Ensembl - ENSDARG00000006588
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-239f4.6ENSDARG0000009334761
mucms1 / mucin, multiple PTS and SEA group, member 1ENSDARG0000006956661


Protein motifs (from Interpro)
Interpro ID Name
 IPR000082  SEA domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr