ENSDARG00000007449


Danio rerio

Features
Gene ID: ENSDARG00000007449
  
Biological name :slc25a39
  
Synonyms : slc25a39 / solute carrier family 25, member 39
  
Possible biological names infered from orthology : Q9BZJ4 / Q9D8K8
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 29872819
Gene end: 29891500
  
Corresponding Affymetrix probe sets: Dr.12516.1.S1_at (Zebrafish Array)   Dr.26127.1.S1_a_at (Zebrafish Array)   NM_200486_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000125965
Ensembl peptide - ENSDARP00000005911
Ensembl peptide - ENSDARP00000118659
NCBI entrez gene - 393458     See in Manteia.
RefSeq - NM_200486
RefSeq - XM_005163929
RefSeq - XM_021469806
RefSeq Peptide - NP_956780
swissprot - I3ISS2
swissprot - E9QI86
swissprot - F1QVQ4
ZFIN ID - ZDB-GENE-040426-1250
Ensembl - ENSDARG00000007449
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC25A39ENSGALG00000042894Gallus gallus
 Q9BZJ4ENSG00000013306Homo sapiens
 Q9D8K8ENSMUSG00000018677Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q6DHC3 / slc25a40 / solute carrier family 25, member 40 / Q8BGP6* / Q8TBP6*ENSDARG0000001585656


Protein motifs (from Interpro)
Interpro ID Name
 IPR002067  Mitochondrial carrier protein
 IPR018108  Mitochondrial substrate/solute carrier
 IPR023395  Mitochondrial carrier domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0009256 nucleate erythrocyte nucleate erythrocyte decreased amount , abnormal
nucleate erythrocyte hemoglobin complex composition , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr