ENSDARG00000007715


Danio rerio

Features
Gene ID: ENSDARG00000007715
  
Biological name :lgsn
  
Synonyms : lengsin, lens protein with glutamine synthetase domain / lgsn
  
Possible biological names infered from orthology : Lengsin / Q5TDP6 / Q8CIX8
  
Species: Danio rerio
  
Chr. number: 11
Strand: -1
Band:
Gene start: 11263451
Gene end: 11266882
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000025002
NCBI entrez gene - 567024     See in Manteia.
RefSeq - NM_001031674
RefSeq Peptide - NP_001026844
swissprot - Q29RF4
ZFIN ID - ZDB-GENE-060312-26
Ensembl - ENSDARG00000007715
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LGSNENSGALG00000016273Gallus gallus
 LGSNENSG00000146166Homo sapiens
 LgsnENSMUSG00000050217Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR008146  Glutamine synthetase, catalytic domain
 IPR008147  Glutamine synthetase, beta-Grasp domain
 IPR014746  Glutamine synthetase/guanido kinase, catalytic domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002089 lens morphogenesis in camera-type eye IMP
 biological_processGO:0006542 glutamine biosynthetic process IEA
 biological_processGO:0006807 nitrogen compound metabolic process IEA
 biological_processGO:0030154 cell differentiation IMP
 cellular_componentGO:0005884 actin filament IDA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004356 glutamate-ammonia ligase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000035 lens lens morphology , abnormal
lens decreased size , abnormal
lens cell morphology , abnormal
lens cell decreased length , abnormal
lens cell vacuolated , abnormal
Show

 ZFA:0000107 eye eye decreased size , abnormal
Show

 ZFA:0000152 retina retina decreased size , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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