ENSDARG00000007818


Danio rerio

Features
Gene ID: ENSDARG00000007818
  
Biological name :palm1b
  
Synonyms : palm1b / paralemmin 1b
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 26237322
Gene end: 26284245
  
Corresponding Affymetrix probe sets: Dr.2836.1.A1_at (Zebrafish Array)   NM_200601_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000152546
Ensembl peptide - ENSDARP00000031322
Ensembl peptide - ENSDARP00000108721
NCBI entrez gene - 393573     See in Manteia.
RefSeq - NM_200601
RefSeq - XM_005163394
RefSeq - XM_005163395
RefSeq Peptide - NP_956895
swissprot - B0V0Y4
ZFIN ID - ZDB-GENE-040426-1147
Ensembl - ENSDARG00000007818
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
palm1a / paralemmin 1a / PALM* / Q9Z0P4* / O75781* / paralemmin* / Paralemmin-1 *ENSDARG0000002688253
palmda / palmdelphin aENSDARG0000000191329
palmdb / palmdelphin b / PALMD* / Q9NP74* / palmdelphin*ENSDARG0000003432118
palm2 / paralemmin 2 / Q8IXS6*ENSDARG0000009900515
CR352310.1ENSDARG0000011678913
palm2 / paralemmin 2 / AKAP2* / Q9Y2D5* / PALM2-AKAP2* / PALM2-AKAP2 readthrough* / A-kinase anchoring protein 2*ENSDARG0000006960811


Protein motifs (from Interpro)
Interpro ID Name
 IPR004965  Paralemmin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008360 regulation of cell shape IEA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr