ENSDARG00000007886


Danio rerio

Features
Gene ID: ENSDARG00000007886
  
Biological name :slc35b2
  
Synonyms : slc35b2 / solute carrier family 35 (adenosine 3-phospho 5-phosphosulfate transporter), member B2
  
Possible biological names infered from orthology : Q8TB61 / Q91ZN5 / solute carrier family 35 member B2
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 51237646
Gene end: 51267192
  
Corresponding Affymetrix probe sets: Dr.22112.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000020170
Ensembl peptide - ENSDARP00000130167
NCBI entrez gene - 402931     See in Manteia.
swissprot - Q6P101
ZFIN ID - ZDB-GENE-050213-1
Ensembl - ENSDARG00000007886
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC35B2ENSGALG00000010174Gallus gallus
 Q8TB61ENSG00000157593Homo sapiens
 Q91ZN5ENSMUSG00000037089Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q66HX0 / slc35b1 / solute carrier family 35, member B1 / P97858* / P78383* / Mus musculus solute carrier family 35, member B1 (Slc35b1), transcript variant 2, mRNA.*ENSDARG0000003821322
slc35b3 / solute carrier family 35 (adenosine 3-phospho 5-phosphosulfate transporter), member B3 / Q922Q5* / Q9H1N7* / solute carrier family 35 member B3*ENSDARG0000004543719


Protein motifs (from Interpro)
Interpro ID Name
 IPR013657  UAA transporter


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001501 skeletal system development IMP
 biological_processGO:0001503 ossification IMP
 biological_processGO:0001649 osteoblast differentiation IMP
 biological_processGO:0006024 glycosaminoglycan biosynthetic process IMP
 biological_processGO:0030166 proteoglycan biosynthetic process IMP
 biological_processGO:0030198 extracellular matrix organization IMP
 biological_processGO:0031290 retinal ganglion cell axon guidance IMP
 biological_processGO:0042476 odontogenesis IMP
 biological_processGO:0051216 cartilage development IMP
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:1902559 3"-phospho-5"-adenylyl sulfate transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030173 integral component of Golgi membrane IBA
 cellular_componentGO:0030176 integral component of endoplasmic reticulum membrane IBA
 molecular_functionGO:0046964 3"-phosphoadenosine 5"-phosphosulfate transmembrane transporter activity IBA


Pathways (from Reactome)
Pathway description
Transport and synthesis of PAPS
Transport of nucleotide sugars


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000079 telencephalon telencephalon decreased size , abnormal
telencephalon anterior-most region truncated , abnormal
Show

 ZFA:0000095 pharyngeal arch 3-7 skeleton pharyngeal arch 3-7 skeleton quality , abnormal
pharyngeal arch 3-7 skeleton decreased size , abnormal
pharyngeal arch 3-7 skeleton decreased length , abnormal
pharyngeal arch 3-7 skeleton increased thickness , abnormal
pharyngeal arch 3-7 skeleton increased size , abnormal
Show

 ZFA:0000184 cleithrum cleithrum decreased size , abnormal
cleithrum malformed , abnormal
Show

 ZFA:0000250 opercle opercle decreased size , abnormal
opercle malformed , abnormal
Show

 ZFA:0000252 optic tract optic tract structure , abnormal
Show

 ZFA:0000396 nervous system nervous system quality , abnormal
Show

 ZFA:0000655 dorsomedial optic tract dorsomedial optic tract composition , abnormal
Show

 ZFA:0001094 whole organism whole organism lethal (sensu genetics) , abnormal
whole organism anterior-posterior axis dwarf-like , abnormal
whole organism viability , abnormal
Show

 ZFA:0001161 pectoral fin pectoral fin absent , abnormal
Show

 ZFA:0001227 mandibular arch skeleton mandibular arch skeleton decreased size , abnormal
mandibular arch skeleton decreased length , abnormal
mandibular arch skeleton increased thickness , abnormal
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 ZFA:0001239 ceratobranchial 5 bone ceratobranchial 5 bone decreased length , abnormal
ceratobranchial 5 bone has fewer parts of type ceratobranchial 5 tooth , abnormal
ceratobranchial 5 bone ossified , abnormal
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 ZFA:0001276 pharyngeal arch 2 skeleton pharyngeal arch 2 skeleton decreased size , abnormal
pharyngeal arch 2 skeleton decreased length , abnormal
pharyngeal arch 2 skeleton increased thickness , abnormal
Show

 ZFA:0001400 ceratohyal cartilage ceratohyal cartilage chondrocyte disorganized , abnormal
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 ZFA:0001458 cranial cartilage cranial cartilage apoptotic , abnormal
cranial cartilage deformed , abnormal
cranial cartilage collagen trimer morphology , abnormal
cranial cartilage collagen type I trimer decreased amount , abnormal
cranial cartilage collagen type VI trimer absent , abnormal
cranial cartilage extracellular matrix composition , abnormal
cranial cartilage extracellular matrix component spatial pattern , abnormal
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 ZFA:0001501 cartilage element cartilage element decreased length , abnormal
cartilage element increased thickness , abnormal
Show

 ZFA:0001590 dermal bone dermal bone hypoplastic , abnormal
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 ZFA:0001634 perichondrium perichondrium increased thickness , abnormal
perichondrium rough , abnormal
perichondrium cell increased size , abnormal
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 ZFA:0009084 chondrocyte chondrocyte morphology , abnormal
chondrocyte color , abnormal
chondrocyte circular , abnormal
chondrocyte attached to chondrocyte , abnormal
chondrocyte nucleus shape , abnormal
chondrocyte plasma membrane undulate , abnormal
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 ZFA:0009310 retinal ganglion cell retinal ganglion cell axon misrouted , abnormal
retinal ganglion cell axon branched , abnormal
retinal ganglion cell axon displaced , abnormal
retinal ganglion cell axon organization quality , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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