ENSDARG00000007918


Danio rerio

Features
Gene ID: ENSDARG00000007918
  
Biological name :ttc27
  
Synonyms : tetratricopeptide repeat domain 27 / ttc27
  
Possible biological names infered from orthology : Q6P3X3 / Q8CD92
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 22760126
Gene end: 22947117
  
Corresponding Affymetrix probe sets: Dr.18299.1.S1_at (Zebrafish Array)   NM_173285_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000126427
Ensembl peptide - ENSDARP00000152074
NCBI entrez gene - 317640     See in Manteia.
RefSeq - NM_173285
RefSeq Peptide - NP_775392
swissprot - K7DY99
ZFIN ID - ZDB-GENE-030102-1
Ensembl - ENSDARG00000007918
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TTC27ENSGALG00000010538Gallus gallus
 TTC27ENSG00000018699Homo sapiens
 Ttc27ENSMUSG00000024078Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR019734  Tetratricopeptide repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000114 heart heart quality , abnormal
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 ZFA:0001114 head head decreased width , abnormal
head pointed , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr